Atlas of Genetics and Cytogenetics in Oncology and Haematology


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PWAR1 (Prader Willi/Angelman region RNA 1)

Identity

Alias (NCBI)D15S227E
PAR-1
PAR1
HGNC (Hugo) PWAR1
HGNC Alias symbPAR1
PAR-1
HGNC Alias namePrader Willi/Angelman region 1
LocusID (NCBI) 145624
Atlas_Id 53429
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 25135642 and ends at 25138053 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PWAR1   30089
Cards
Entrez_Gene (NCBI)PWAR1  145624  Prader Willi/Angelman region RNA 1
AliasesD15S227E; PAR-1; PAR1
GeneCards (Weizmann)PWAR1
Ensembl hg19 (Hinxton)ENSG00000279050 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000279050 [Gene_View]  ENSG00000279050 [Sequence]  chr15:25135642-25138053 [Contig_View]  PWAR1 [Vega]
ICGC DataPortalENSG00000279050
TCGA cBioPortalPWAR1
AceView (NCBI)PWAR1
Genatlas (Paris)PWAR1
WikiGenes145624
SOURCE (Princeton)PWAR1
Genetics Home Reference (NIH)PWAR1
Genomic and cartography
GoldenPath hg38 (UCSC)PWAR1  -     chr15:25135642-25138053 +  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PWAR1  -     15q11.2   [Description]    (hg19-Feb_2009)
GoldenPathPWAR1 - 15q11.2 [CytoView hg19]  PWAR1 - 15q11.2 [CytoView hg38]
ImmunoBaseENSG00000279050
genome Data Viewer NCBIPWAR1 [Mapview hg19]  
OMIM176270   600161   
Gene and transcription
Genbank (Entrez)AF019616
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PWAR1
Alternative Splicing GalleryENSG00000279050
Gene ExpressionPWAR1 [ NCBI-GEO ]   PWAR1 [ EBI - ARRAY_EXPRESS ]   PWAR1 [ SEEK ]   PWAR1 [ MEM ]
Gene Expression Viewer (FireBrowse)PWAR1 [ Firebrowse - Broad ]
GenevisibleExpression of PWAR1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)145624
GTEX Portal (Tissue expression)PWAR1
Human Protein AtlasENSG00000279050-PWAR1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PWAR1
DMDM Disease mutations145624
Blocks (Seattle)PWAR1
Human Protein Atlas [tissue]ENSG00000279050-PWAR1 [tissue]
Protein Interaction databases
FunCoupENSG00000279050
BioGRIDPWAR1
STRING (EMBL)PWAR1
ZODIACPWAR1
Ontologies - Pathways
Huge Navigator PWAR1 [HugePedia]
snp3D : Map Gene to Disease145624
BioCentury BCIQPWAR1
ClinGenPWAR1
Clinical trials, drugs, therapy
Protein Interactions : CTD145624
Clinical trialPWAR1
Miscellaneous
canSAR (ICR)PWAR1 (select the gene name)
HarmonizomePWAR1
DataMed IndexPWAR1
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePWAR1
EVEXPWAR1
GoPubMedPWAR1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jul 16 15:32:07 CEST 2020

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