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PWRN4 (Prader-Willi region non-protein coding RNA 4)

Identity

Alias (NCBI)LINC01084
HGNC (Hugo) PWRN4
HGNC Alias symbLINC01084
HGNC Alias namelong intergenic non-protein coding RNA 1084
LocusID (NCBI) 105370731
Atlas_Id 77608
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 23975147 and ends at 24088154 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PWRN4   49130
Cards
Entrez_Gene (NCBI)PWRN4  105370731  Prader-Willi region non-protein coding RNA 4
AliasesLINC01084
GeneCards (Weizmann)PWRN4
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr15:23975147-24088154 [Contig_View]  PWRN4 [Vega]
TCGA cBioPortalPWRN4
AceView (NCBI)PWRN4
Genatlas (Paris)PWRN4
WikiGenes105370731
SOURCE (Princeton)PWRN4
Genetics Home Reference (NIH)PWRN4
Genomic and cartography
GoldenPath hg38 (UCSC)PWRN4  -     chr15:23975147-24088154 +  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PWRN4  -     15q11.2   [Description]    (hg19-Feb_2009)
GoldenPathPWRN4 - 15q11.2 [CytoView hg19]  PWRN4 - 15q11.2 [CytoView hg38]
genome Data Viewer NCBIPWRN4 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BI712798 CK820921
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PWRN4
Gene ExpressionPWRN4 [ NCBI-GEO ]   PWRN4 [ EBI - ARRAY_EXPRESS ]   PWRN4 [ SEEK ]   PWRN4 [ MEM ]
Gene Expression Viewer (FireBrowse)PWRN4 [ Firebrowse - Broad ]
GenevisibleExpression of PWRN4 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)105370731
GTEX Portal (Tissue expression)PWRN4
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PWRN4
DMDM Disease mutations105370731
Blocks (Seattle)PWRN4
Protein Interaction databases
BioGRIDPWRN4
STRING (EMBL)PWRN4
ZODIACPWRN4
Ontologies - Pathways
Huge Navigator PWRN4 [HugePedia]
snp3D : Map Gene to Disease105370731
BioCentury BCIQPWRN4
ClinGenPWRN4
Clinical trials, drugs, therapy
Protein Interactions : CTD105370731
Clinical trialPWRN4
Miscellaneous
canSAR (ICR)PWRN4 (select the gene name)
HarmonizomePWRN4
DataMed IndexPWRN4
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMinePWRN4
EVEXPWRN4
GoPubMedPWRN4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jul 16 16:24:35 CEST 2020

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