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PXN-AS1 (PXN antisense RNA 1)

Identity

Alias_namesPXN antisense RNA 1 (non-protein coding)
Alias_symbol (synonym)EyeLinc4
Other alias
HGNC (Hugo) PXN-AS1
LocusID (NCBI) 100506649
Atlas_Id 72422
Location 12q24.23  [Link to chromosome band 12q24]
Location_base_pair Starts at 120201291 and ends at 120212828 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PXN-AS1   44123
Cards
Entrez_Gene (NCBI)PXN-AS1  100506649  PXN antisense RNA 1
AliasesEyeLinc4
GeneCards (Weizmann)PXN-AS1
Ensembl hg19 (Hinxton)ENSG00000255857 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000255857 [Gene_View]  chr12:120201291-120212828 [Contig_View]  PXN-AS1 [Vega]
ICGC DataPortalENSG00000255857
TCGA cBioPortalPXN-AS1
AceView (NCBI)PXN-AS1
Genatlas (Paris)PXN-AS1
WikiGenes100506649
SOURCE (Princeton)PXN-AS1
Genetics Home Reference (NIH)PXN-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)PXN-AS1  -     chr12:120201291-120212828 +  12q24.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PXN-AS1  -     12q24.23   [Description]    (hg19-Feb_2009)
EnsemblPXN-AS1 - 12q24.23 [CytoView hg19]  PXN-AS1 - 12q24.23 [CytoView hg38]
Mapping of homologs : NCBIPXN-AS1 [Mapview hg19]  PXN-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI767458 CV808970
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PXN-AS1
Cluster EST : UnigeneHs.569205 [ NCBI ]
CGAP (NCI)Hs.569205
Alternative Splicing GalleryENSG00000255857
Gene ExpressionPXN-AS1 [ NCBI-GEO ]   PXN-AS1 [ EBI - ARRAY_EXPRESS ]   PXN-AS1 [ SEEK ]   PXN-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)PXN-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506649
GTEX Portal (Tissue expression)PXN-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PXN-AS1
DMDM Disease mutations100506649
Blocks (Seattle)PXN-AS1
Human Protein AtlasENSG00000255857
Protein Interaction databases
FunCoupENSG00000255857
BioGRIDPXN-AS1
STRING (EMBL)PXN-AS1
ZODIACPXN-AS1
Ontologies - Pathways
Huge Navigator PXN-AS1 [HugePedia]
snp3D : Map Gene to Disease100506649
BioCentury BCIQPXN-AS1
ClinGenPXN-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506649
Clinical trialPXN-AS1
Miscellaneous
canSAR (ICR)PXN-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMinePXN-AS1
EVEXPXN-AS1
GoPubMedPXN-AS1
iHOPPXN-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:35:43 CEST 2017

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