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PYROXD2 (pyridine nucleotide-disulphide oxidoreductase domain 2)

Identity

Alias (NCBI)C10orf33
FP3420
YUEF
HGNC (Hugo) PYROXD2
HGNC Alias symbFLJ23849
HGNC Previous nameC10orf33
HGNC Previous namechromosome 10 open reading frame 33
LocusID (NCBI) 84795
Atlas_Id 57713
Location 10q24.2  [Link to chromosome band 10q24]
Location_base_pair Starts at 98383568 and ends at 98415182 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)PYROXD2   23517
Cards
Entrez_Gene (NCBI)PYROXD2    pyridine nucleotide-disulphide oxidoreductase domain 2
AliasesC10orf33; FP3420; YUEF
GeneCards (Weizmann)PYROXD2
Ensembl hg19 (Hinxton)ENSG00000119943 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000119943 [Gene_View]  ENSG00000119943 [Sequence]  chr10:98383568-98415182 [Contig_View]  PYROXD2 [Vega]
ICGC DataPortalENSG00000119943
TCGA cBioPortalPYROXD2
AceView (NCBI)PYROXD2
Genatlas (Paris)PYROXD2
SOURCE (Princeton)PYROXD2
Genetics Home Reference (NIH)PYROXD2
Genomic and cartography
GoldenPath hg38 (UCSC)PYROXD2  -     chr10:98383568-98415182 -  10q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PYROXD2  -     10q24.2   [Description]    (hg19-Feb_2009)
GoldenPathPYROXD2 - 10q24.2 [CytoView hg19]  PYROXD2 - 10q24.2 [CytoView hg38]
ImmunoBaseENSG00000119943
Genome Data Viewer NCBIPYROXD2 [Mapview hg19]  
OMIM617889   
Gene and transcription
Genbank (Entrez)AF461898 AK022259 AK074429 AK075265 AK123713
RefSeq transcript (Entrez)NM_032709
Consensus coding sequences : CCDS (NCBI)PYROXD2
Gene ExpressionPYROXD2 [ NCBI-GEO ]   PYROXD2 [ EBI - ARRAY_EXPRESS ]   PYROXD2 [ SEEK ]   PYROXD2 [ MEM ]
Gene Expression Viewer (FireBrowse)PYROXD2 [ Firebrowse - Broad ]
GenevisibleExpression of PYROXD2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84795
GTEX Portal (Tissue expression)PYROXD2
Human Protein AtlasENSG00000119943-PYROXD2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N2H3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N2H3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N2H3
PhosPhoSitePlusQ8N2H3
Domains : Interpro (EBI)Amino_oxidase    FAD/NAD-bd_sf   
Domain families : Pfam (Sanger)Amino_oxidase (PF01593)   
Domain families : Pfam (NCBI)pfam01593   
Conserved Domain (NCBI)PYROXD2
SuperfamilyQ8N2H3
AlphaFold pdb e-kbQ8N2H3   
Human Protein Atlas [tissue]ENSG00000119943-PYROXD2 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q8N2H3
IntAct (EBI)Q8N2H3
BioGRIDPYROXD2
STRING (EMBL)PYROXD2
ZODIACPYROXD2
Ontologies - Pathways
QuickGOQ8N2H3
Ontology : AmiGOprotein binding  mitochondrial matrix  mitochondrion organization  oxidoreductase activity  
Ontology : EGO-EBIprotein binding  mitochondrial matrix  mitochondrion organization  oxidoreductase activity  
NDEx NetworkPYROXD2
Atlas of Cancer Signalling NetworkPYROXD2
Wikipedia pathwaysPYROXD2
Orthology - Evolution
OrthoDB84795
GeneTree (enSembl)ENSG00000119943
Phylogenetic Trees/Animal Genes : TreeFamPYROXD2
Homologs : HomoloGenePYROXD2
Homology/Alignments : Family Browser (UCSC)PYROXD2
Gene fusions - Rearrangements
Fusion : QuiverPYROXD2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPYROXD2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PYROXD2
dbVarPYROXD2
ClinVarPYROXD2
MonarchPYROXD2
1000_GenomesPYROXD2 
Exome Variant ServerPYROXD2
GNOMAD BrowserENSG00000119943
Varsome BrowserPYROXD2
ACMGPYROXD2 variants
VarityQ8N2H3
Genomic Variants (DGV)PYROXD2 [DGVbeta]
DECIPHERPYROXD2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPYROXD2 
Mutations
ICGC Data PortalPYROXD2 
TCGA Data PortalPYROXD2 
Broad Tumor PortalPYROXD2
OASIS PortalPYROXD2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPYROXD2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DPYROXD2
Mutations and Diseases : HGMDPYROXD2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaPYROXD2
DgiDB (Drug Gene Interaction Database)PYROXD2
DoCM (Curated mutations)PYROXD2
CIViC (Clinical Interpretations of Variants in Cancer)PYROXD2
Cancer3DPYROXD2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM617889   
Orphanet
DisGeNETPYROXD2
MedgenPYROXD2
Genetic Testing Registry PYROXD2
NextProtQ8N2H3 [Medical]
GENETestsPYROXD2
Target ValidationPYROXD2
Huge Navigator PYROXD2 [HugePedia]
ClinGenPYROXD2
Clinical trials, drugs, therapy
MyCancerGenomePYROXD2
Protein Interactions : CTDPYROXD2
Pharm GKB GenePA165549043
PharosQ8N2H3
Clinical trialPYROXD2
Miscellaneous
canSAR (ICR)PYROXD2
HarmonizomePYROXD2
DataMed IndexPYROXD2
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPYROXD2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:27:40 CEST 2021

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