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PYY2 (peptide YY 2 (pseudogene))

Identity

Alias_namespeptide YY, 2 (seminalplasmin)
Other alias-
HGNC (Hugo) PYY2
LocusID (NCBI) 23615
Atlas_Id 72435
Location 17q11.2  [Link to chromosome band 17q11]
Location_base_pair Starts at 28226814 and ends at 28228066 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PYY2   9749
Cards
Entrez_Gene (NCBI)PYY2  23615  peptide YY 2 (pseudogene)
Aliases
GeneCards (Weizmann)PYY2
Ensembl hg19 (Hinxton)ENSG00000237575 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000237575 [Gene_View]  chr17:28226814-28228066 [Contig_View]  PYY2 [Vega]
ICGC DataPortalENSG00000237575
TCGA cBioPortalPYY2
AceView (NCBI)PYY2
Genatlas (Paris)PYY2
WikiGenes23615
SOURCE (Princeton)PYY2
Genetics Home Reference (NIH)PYY2
Genomic and cartography
GoldenPath hg38 (UCSC)PYY2  -     chr17:28226814-28228066 +  17q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PYY2  -     17q11.2   [Description]    (hg19-Feb_2009)
EnsemblPYY2 - 17q11.2 [CytoView hg19]  PYY2 - 17q11.2 [CytoView hg38]
Mapping of homologs : NCBIPYY2 [Mapview hg19]  PYY2 [Mapview hg38]
OMIM606637   
Gene and transcription
Genbank (Entrez)AF222904 BC093811 BC093813
RefSeq transcript (Entrez)NM_021093
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PYY2
Cluster EST : UnigeneHs.157195 [ NCBI ]
CGAP (NCI)Hs.157195
Alternative Splicing GalleryENSG00000237575
Gene ExpressionPYY2 [ NCBI-GEO ]   PYY2 [ EBI - ARRAY_EXPRESS ]   PYY2 [ SEEK ]   PYY2 [ MEM ]
Gene Expression Viewer (FireBrowse)PYY2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23615
GTEX Portal (Tissue expression)PYY2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NRI6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NRI6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NRI6
Splice isoforms : SwissVarQ9NRI6
PhosPhoSitePlusQ9NRI6
Domains : Interpro (EBI)Pancreatic_hormone-like   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PYY2
DMDM Disease mutations23615
Blocks (Seattle)PYY2
SuperfamilyQ9NRI6
Human Protein AtlasENSG00000237575
Peptide AtlasQ9NRI6
HPRD07589
IPIIPI00026910   
Protein Interaction databases
DIP (DOE-UCLA)Q9NRI6
IntAct (EBI)Q9NRI6
FunCoupENSG00000237575
BioGRIDPYY2
STRING (EMBL)PYY2
ZODIACPYY2
Ontologies - Pathways
QuickGOQ9NRI6
Ontology : AmiGOG-protein coupled receptor binding  neuropeptide hormone activity  extracellular space  neuropeptide signaling pathway  cell-cell signaling  digestion  feeding behavior  regulation of appetite  
Ontology : EGO-EBIG-protein coupled receptor binding  neuropeptide hormone activity  extracellular space  neuropeptide signaling pathway  cell-cell signaling  digestion  feeding behavior  regulation of appetite  
NDEx NetworkPYY2
Atlas of Cancer Signalling NetworkPYY2
Wikipedia pathwaysPYY2
Orthology - Evolution
OrthoDB23615
GeneTree (enSembl)ENSG00000237575
Phylogenetic Trees/Animal Genes : TreeFamPYY2
HOVERGENQ9NRI6
HOGENOMQ9NRI6
Homologs : HomoloGenePYY2
Homology/Alignments : Family Browser (UCSC)PYY2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPYY2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PYY2
dbVarPYY2
ClinVarPYY2
1000_GenomesPYY2 
Exome Variant ServerPYY2
ExAC (Exome Aggregation Consortium)PYY2 (select the gene name)
Genetic variants : HAPMAP23615
Genomic Variants (DGV)PYY2 [DGVbeta]
DECIPHERPYY2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPYY2 
Mutations
ICGC Data PortalPYY2 
TCGA Data PortalPYY2 
Broad Tumor PortalPYY2
OASIS PortalPYY2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDPYY2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PYY2
DgiDB (Drug Gene Interaction Database)PYY2
DoCM (Curated mutations)PYY2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PYY2 (select a term)
intoGenPYY2
Cancer3DPYY2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606637   
Orphanet
MedgenPYY2
Genetic Testing Registry PYY2
NextProtQ9NRI6 [Medical]
TSGene23615
GENETestsPYY2
Target ValidationPYY2
Huge Navigator PYY2 [HugePedia]
snp3D : Map Gene to Disease23615
BioCentury BCIQPYY2
ClinGenPYY2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23615
Chemical/Pharm GKB GenePA34091
Clinical trialPYY2
Miscellaneous
canSAR (ICR)PYY2 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePYY2
EVEXPYY2
GoPubMedPYY2
iHOPPYY2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:38:01 CEST 2017

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