Atlas of Genetics and Cytogenetics in Oncology and Haematology


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QIQN5815 (uncharacterized LOC100129033)

Identity

HGNC (Hugo) -
LocusID (NCBI) 100129033
Atlas_Id 72439
Location 6p25.1  [Link to chromosome band 6p25]
Location_base_pair Starts at 5044980 and ends at 5045900 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)QIQN5815  100129033  uncharacterized LOC100129033
Aliases
GeneCards (Weizmann)QIQN5815
Ensembl hg19 (Hinxton) [Gene_View]  chr6:5044980-5045900 [Contig_View]  QIQN5815 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr6:5044980-5045900 [Contig_View]  QIQN5815 [Vega]
TCGA cBioPortalQIQN5815
AceView (NCBI)QIQN5815
Genatlas (Paris)QIQN5815
WikiGenes100129033
SOURCE (Princeton)QIQN5815
Genetics Home Reference (NIH)QIQN5815
Genomic and cartography
GoldenPath hg19 (UCSC)QIQN5815  -     chr6:5044980-5045900 +  6p25.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)QIQN5815  -     6p25.1   [Description]    (hg38-Dec_2013)
EnsemblQIQN5815 - 6p25.1 [CytoView hg19]  QIQN5815 - 6p25.1 [CytoView hg38]
Mapping of homologs : NCBIQIQN5815 [Mapview hg19]  QIQN5815 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY358807
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)AC_000138 NC_000006 NC_018917 NT_007592 NW_001838973 NW_004078026
Consensus coding sequences : CCDS (NCBI)QIQN5815
Cluster EST : UnigeneHs.640264 [ NCBI ]
CGAP (NCI)Hs.640264
Gene ExpressionQIQN5815 [ NCBI-GEO ]   QIQN5815 [ EBI - ARRAY_EXPRESS ]   QIQN5815 [ SEEK ]   QIQN5815 [ MEM ]
Gene Expression Viewer (FireBrowse)QIQN5815 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100129033
GTEX Portal (Tissue expression)QIQN5815
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UWF5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UWF5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UWF5
Splice isoforms : SwissVarQ6UWF5
PhosPhoSitePlusQ6UWF5
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)QIQN5815
DMDM Disease mutations100129033
Blocks (Seattle)QIQN5815
SuperfamilyQ6UWF5
Peptide AtlasQ6UWF5
IPIIPI00432179   
Protein Interaction databases
DIP (DOE-UCLA)Q6UWF5
IntAct (EBI)Q6UWF5
BioGRIDQIQN5815
STRING (EMBL)QIQN5815
ZODIACQIQN5815
Ontologies - Pathways
QuickGOQ6UWF5
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkQIQN5815
Atlas of Cancer Signalling NetworkQIQN5815
Wikipedia pathwaysQIQN5815
Orthology - Evolution
OrthoDB100129033
Phylogenetic Trees/Animal Genes : TreeFam-
HOVERGENQ6UWF5
HOGENOMQ6UWF5
Homologs : HomoloGeneQIQN5815
Homology/Alignments : Family Browser (UCSC)QIQN5815
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerQIQN5815 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)QIQN5815
dbVarQIQN5815
ClinVarQIQN5815
1000_GenomesQIQN5815 
Exome Variant ServerQIQN5815
ExAC (Exome Aggregation Consortium)QIQN5815 (select the gene name)
Genetic variants : HAPMAP100129033
Genomic Variants (DGV)QIQN5815 [DGVbeta]
DECIPHER (Syndromes)6:5044980-5045900  
CONAN: Copy Number AnalysisQIQN5815 
Mutations
ICGC Data Portal- 
TCGA Data Portal- 
Broad Tumor Portal-
OASIS Portal- [ Somatic mutations - Copy number]
Mutations and Diseases : HGMD-
BioMutasearch QIQN5815
DgiDB (Drug Gene Interaction Database)QIQN5815
DoCM (Curated mutations)QIQN5815 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)QIQN5815 (select a term)
intoGenQIQN5815
Cancer3DQIQN5815(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenQIQN5815
Genetic Testing Registry QIQN5815
NextProtQ6UWF5 [Medical]
TSGene100129033
GENETestsQIQN5815
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100129033
BioCentury BCIQQIQN5815
ClinGenQIQN5815
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100129033
Clinical trialQIQN5815
Miscellaneous
canSAR (ICR)QIQN5815 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineQIQN5815
EVEXQIQN5815
GoPubMedQIQN5815
iHOPQIQN5815
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Dec 29 13:47:51 CET 2016

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