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QPCT (glutaminyl-peptide cyclotransferase)

Identity

Alias_symbol (synonym)QC
GCT
HGNC (Hugo) QPCT
LocusID (NCBI) 25797
Atlas_Id 53467
Location 2p22.2  [Link to chromosome band 2p22]
Location_base_pair Starts at 37571753 and ends at 37600465 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
PRKD3 (2p22.2) / QPCT (2p22.2)RGL3 (19p13.2) / QPCT (2p22.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)QPCT   9753
Cards
Entrez_Gene (NCBI)QPCT  25797  glutaminyl-peptide cyclotransferase
AliasesGCT; QC; sQC
GeneCards (Weizmann)QPCT
Ensembl hg19 (Hinxton)ENSG00000115828 [Gene_View]  chr2:37571753-37600465 [Contig_View]  QPCT [Vega]
Ensembl hg38 (Hinxton)ENSG00000115828 [Gene_View]  chr2:37571753-37600465 [Contig_View]  QPCT [Vega]
ICGC DataPortalENSG00000115828
TCGA cBioPortalQPCT
AceView (NCBI)QPCT
Genatlas (Paris)QPCT
WikiGenes25797
SOURCE (Princeton)QPCT
Genetics Home Reference (NIH)QPCT
Genomic and cartography
GoldenPath hg19 (UCSC)QPCT  -     chr2:37571753-37600465 +  2p22.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)QPCT  -     2p22.2   [Description]    (hg38-Dec_2013)
EnsemblQPCT - 2p22.2 [CytoView hg19]  QPCT - 2p22.2 [CytoView hg38]
Mapping of homologs : NCBIQPCT [Mapview hg19]  QPCT [Mapview hg38]
OMIM607065   
Gene and transcription
Genbank (Entrez)AB062487 AK290605 BC015460 BC020456 BC036721
RefSeq transcript (Entrez)NM_012413
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)QPCT
Cluster EST : UnigeneHs.79033 [ NCBI ]
CGAP (NCI)Hs.79033
Alternative Splicing GalleryENSG00000115828
Gene ExpressionQPCT [ NCBI-GEO ]   QPCT [ EBI - ARRAY_EXPRESS ]   QPCT [ SEEK ]   QPCT [ MEM ]
Gene Expression Viewer (FireBrowse)QPCT [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)25797
GTEX Portal (Tissue expression)QPCT
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ16769   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ16769  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ16769
Splice isoforms : SwissVarQ16769
Catalytic activity : Enzyme2.3.2.5 [ Enzyme-Expasy ]   2.3.2.52.3.2.5 [ IntEnz-EBI ]   2.3.2.5 [ BRENDA ]   2.3.2.5 [ KEGG ]   
PhosPhoSitePlusQ16769
Domains : Interpro (EBI)Peptidase_M28   
Domain families : Pfam (Sanger)Peptidase_M28 (PF04389)   
Domain families : Pfam (NCBI)pfam04389   
Conserved Domain (NCBI)QPCT
DMDM Disease mutations25797
Blocks (Seattle)QPCT
PDB (SRS)1MOI    2AFM    2AFO    2AFS    2AFU    2AFW    2AFX    2AFZ    2ZED    2ZEE    2ZEF    2ZEG    2ZEH    2ZEL    2ZEM    2ZEN    2ZEO    2ZEP    3PBB    3PBE    3SI0    4YU9    4YWY   
PDB (PDBSum)1MOI    2AFM    2AFO    2AFS    2AFU    2AFW    2AFX    2AFZ    2ZED    2ZEE    2ZEF    2ZEG    2ZEH    2ZEL    2ZEM    2ZEN    2ZEO    2ZEP    3PBB    3PBE    3SI0    4YU9    4YWY   
PDB (IMB)1MOI    2AFM    2AFO    2AFS    2AFU    2AFW    2AFX    2AFZ    2ZED    2ZEE    2ZEF    2ZEG    2ZEH    2ZEL    2ZEM    2ZEN    2ZEO    2ZEP    3PBB    3PBE    3SI0    4YU9    4YWY   
PDB (RSDB)1MOI    2AFM    2AFO    2AFS    2AFU    2AFW    2AFX    2AFZ    2ZED    2ZEE    2ZEF    2ZEG    2ZEH    2ZEL    2ZEM    2ZEN    2ZEO    2ZEP    3PBB    3PBE    3SI0    4YU9    4YWY   
Structural Biology KnowledgeBase1MOI    2AFM    2AFO    2AFS    2AFU    2AFW    2AFX    2AFZ    2ZED    2ZEE    2ZEF    2ZEG    2ZEH    2ZEL    2ZEM    2ZEN    2ZEO    2ZEP    3PBB    3PBE    3SI0    4YU9    4YWY   
SCOP (Structural Classification of Proteins)1MOI    2AFM    2AFO    2AFS    2AFU    2AFW    2AFX    2AFZ    2ZED    2ZEE    2ZEF    2ZEG    2ZEH    2ZEL    2ZEM    2ZEN    2ZEO    2ZEP    3PBB    3PBE    3SI0    4YU9    4YWY   
CATH (Classification of proteins structures)1MOI    2AFM    2AFO    2AFS    2AFU    2AFW    2AFX    2AFZ    2ZED    2ZEE    2ZEF    2ZEG    2ZEH    2ZEL    2ZEM    2ZEN    2ZEO    2ZEP    3PBB    3PBE    3SI0    4YU9    4YWY   
SuperfamilyQ16769
Human Protein AtlasENSG00000115828
Peptide AtlasQ16769
HPRD06140
IPIIPI00003919   IPI00954591   IPI00386450   IPI00893489   
Protein Interaction databases
DIP (DOE-UCLA)Q16769
IntAct (EBI)Q16769
FunCoupENSG00000115828
BioGRIDQPCT
STRING (EMBL)QPCT
ZODIACQPCT
Ontologies - Pathways
QuickGOQ16769
Ontology : AmiGOcellular protein modification process  zinc ion binding  glutaminyl-peptide cyclotransferase activity  peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase  extracellular exosome  
Ontology : EGO-EBIcellular protein modification process  zinc ion binding  glutaminyl-peptide cyclotransferase activity  peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase  extracellular exosome  
NDEx NetworkQPCT
Atlas of Cancer Signalling NetworkQPCT
Wikipedia pathwaysQPCT
Orthology - Evolution
OrthoDB25797
GeneTree (enSembl)ENSG00000115828
Phylogenetic Trees/Animal Genes : TreeFamQPCT
HOVERGENQ16769
HOGENOMQ16769
Homologs : HomoloGeneQPCT
Homology/Alignments : Family Browser (UCSC)QPCT
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerQPCT [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)QPCT
dbVarQPCT
ClinVarQPCT
1000_GenomesQPCT 
Exome Variant ServerQPCT
ExAC (Exome Aggregation Consortium)QPCT (select the gene name)
Genetic variants : HAPMAP25797
Genomic Variants (DGV)QPCT [DGVbeta]
DECIPHER (Syndromes)2:37571753-37600465  ENSG00000115828
CONAN: Copy Number AnalysisQPCT 
Mutations
ICGC Data PortalQPCT 
TCGA Data PortalQPCT 
Broad Tumor PortalQPCT
OASIS PortalQPCT [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICQPCT  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDQPCT
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch QPCT
DgiDB (Drug Gene Interaction Database)QPCT
DoCM (Curated mutations)QPCT (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)QPCT (select a term)
intoGenQPCT
Cancer3DQPCT(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607065   
Orphanet
MedgenQPCT
Genetic Testing Registry QPCT
NextProtQ16769 [Medical]
TSGene25797
GENETestsQPCT
Huge Navigator QPCT [HugePedia]
snp3D : Map Gene to Disease25797
BioCentury BCIQQPCT
ClinGenQPCT
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD25797
Chemical/Pharm GKB GenePA34095
Clinical trialQPCT
Miscellaneous
canSAR (ICR)QPCT (select the gene name)
Probes
Litterature
PubMed34 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineQPCT
EVEXQPCT
GoPubMedQPCT
iHOPQPCT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Jan 21 16:19:16 CET 2017

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