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QPCTL (glutaminyl-peptide cyclotransferase like)

Identity

Alias_symbol (synonym)FLJ20084
Other aliasgQC
HGNC (Hugo) QPCTL
LocusID (NCBI) 54814
Atlas_Id 72440
Location 19q13.32  [Link to chromosome band 19q13]
Location_base_pair Starts at 45692483 and ends at 45703990 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
QPCTL (19q13.32) / ETHE1 (19q13.31)QPCTL (19q13.32) / MRPL4 (19p13.2)QPCTL (19q13.32) / PSIP1 (9p22.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)QPCTL   25952
Cards
Entrez_Gene (NCBI)QPCTL  54814  glutaminyl-peptide cyclotransferase like
AliasesgQC
GeneCards (Weizmann)QPCTL
Ensembl hg19 (Hinxton)ENSG00000011478 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000011478 [Gene_View]  chr19:45692483-45703990 [Contig_View]  QPCTL [Vega]
ICGC DataPortalENSG00000011478
TCGA cBioPortalQPCTL
AceView (NCBI)QPCTL
Genatlas (Paris)QPCTL
WikiGenes54814
SOURCE (Princeton)QPCTL
Genetics Home Reference (NIH)QPCTL
Genomic and cartography
GoldenPath hg38 (UCSC)QPCTL  -     chr19:45692483-45703990 +  19q13.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)QPCTL  -     19q13.32   [Description]    (hg19-Feb_2009)
EnsemblQPCTL - 19q13.32 [CytoView hg19]  QPCTL - 19q13.32 [CytoView hg38]
Mapping of homologs : NCBIQPCTL [Mapview hg19]  QPCTL [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK000091 AK172764 AK222636 BC011553 BP216511
RefSeq transcript (Entrez)NM_001163377 NM_017659
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)QPCTL
Cluster EST : UnigeneHs.631556 [ NCBI ]
CGAP (NCI)Hs.631556
Alternative Splicing GalleryENSG00000011478
Gene ExpressionQPCTL [ NCBI-GEO ]   QPCTL [ EBI - ARRAY_EXPRESS ]   QPCTL [ SEEK ]   QPCTL [ MEM ]
Gene Expression Viewer (FireBrowse)QPCTL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54814
GTEX Portal (Tissue expression)QPCTL
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NXS2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NXS2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NXS2
Splice isoforms : SwissVarQ9NXS2
Catalytic activity : Enzyme2.3.2.5 [ Enzyme-Expasy ]   2.3.2.52.3.2.5 [ IntEnz-EBI ]   2.3.2.5 [ BRENDA ]   2.3.2.5 [ KEGG ]   
PhosPhoSitePlusQ9NXS2
Domains : Interpro (EBI)Peptidase_M28   
Domain families : Pfam (Sanger)Peptidase_M28 (PF04389)   
Domain families : Pfam (NCBI)pfam04389   
Conserved Domain (NCBI)QPCTL
DMDM Disease mutations54814
Blocks (Seattle)QPCTL
PDB (SRS)3PB4    3PB6    3PB7    3PB8    3PB9   
PDB (PDBSum)3PB4    3PB6    3PB7    3PB8    3PB9   
PDB (IMB)3PB4    3PB6    3PB7    3PB8    3PB9   
PDB (RSDB)3PB4    3PB6    3PB7    3PB8    3PB9   
Structural Biology KnowledgeBase3PB4    3PB6    3PB7    3PB8    3PB9   
SCOP (Structural Classification of Proteins)3PB4    3PB6    3PB7    3PB8    3PB9   
CATH (Classification of proteins structures)3PB4    3PB6    3PB7    3PB8    3PB9   
SuperfamilyQ9NXS2
Human Protein AtlasENSG00000011478
Peptide AtlasQ9NXS2
HPRD08612
IPIIPI00014877   IPI00943802   
Protein Interaction databases
DIP (DOE-UCLA)Q9NXS2
IntAct (EBI)Q9NXS2
FunCoupENSG00000011478
BioGRIDQPCTL
STRING (EMBL)QPCTL
ZODIACQPCTL
Ontologies - Pathways
QuickGOQ9NXS2
Ontology : AmiGOGolgi membrane  Golgi apparatus  zinc ion binding  membrane  integral component of membrane  glutaminyl-peptide cyclotransferase activity  peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase  
Ontology : EGO-EBIGolgi membrane  Golgi apparatus  zinc ion binding  membrane  integral component of membrane  glutaminyl-peptide cyclotransferase activity  peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase  
NDEx NetworkQPCTL
Atlas of Cancer Signalling NetworkQPCTL
Wikipedia pathwaysQPCTL
Orthology - Evolution
OrthoDB54814
GeneTree (enSembl)ENSG00000011478
Phylogenetic Trees/Animal Genes : TreeFamQPCTL
HOVERGENQ9NXS2
HOGENOMQ9NXS2
Homologs : HomoloGeneQPCTL
Homology/Alignments : Family Browser (UCSC)QPCTL
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerQPCTL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)QPCTL
dbVarQPCTL
ClinVarQPCTL
1000_GenomesQPCTL 
Exome Variant ServerQPCTL
ExAC (Exome Aggregation Consortium)QPCTL (select the gene name)
Genetic variants : HAPMAP54814
Genomic Variants (DGV)QPCTL [DGVbeta]
DECIPHERQPCTL [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisQPCTL 
Mutations
ICGC Data PortalQPCTL 
TCGA Data PortalQPCTL 
Broad Tumor PortalQPCTL
OASIS PortalQPCTL [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICQPCTL  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDQPCTL
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch QPCTL
DgiDB (Drug Gene Interaction Database)QPCTL
DoCM (Curated mutations)QPCTL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)QPCTL (select a term)
intoGenQPCTL
Cancer3DQPCTL(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenQPCTL
Genetic Testing Registry QPCTL
NextProtQ9NXS2 [Medical]
TSGene54814
GENETestsQPCTL
Huge Navigator QPCTL [HugePedia]
snp3D : Map Gene to Disease54814
BioCentury BCIQQPCTL
ClinGenQPCTL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54814
Chemical/Pharm GKB GenePA134922163
Clinical trialQPCTL
Miscellaneous
canSAR (ICR)QPCTL (select the gene name)
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineQPCTL
EVEXQPCTL
GoPubMedQPCTL
iHOPQPCTL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:50:20 CEST 2017

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