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QRFP (pyroglutamylated RFamide peptide)

Identity

Alias_symbol (synonym)26RFa
P518
Other alias
HGNC (Hugo) QRFP
LocusID (NCBI) 347148
Atlas_Id 53324
Location 9q34.12  [Link to chromosome band 9q34]
Location_base_pair Starts at 130893428 and ends at 130896812 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)QRFP   29982
Cards
Entrez_Gene (NCBI)QRFP  347148  pyroglutamylated RFamide peptide
Aliases26RFa; P518
GeneCards (Weizmann)QRFP
Ensembl hg19 (Hinxton)ENSG00000188710 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000188710 [Gene_View]  chr9:130893428-130896812 [Contig_View]  QRFP [Vega]
ICGC DataPortalENSG00000188710
TCGA cBioPortalQRFP
AceView (NCBI)QRFP
Genatlas (Paris)QRFP
WikiGenes347148
SOURCE (Princeton)QRFP
Genetics Home Reference (NIH)QRFP
Genomic and cartography
GoldenPath hg38 (UCSC)QRFP  -     chr9:130893428-130896812 -  9q34.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)QRFP  -     9q34.12   [Description]    (hg19-Feb_2009)
EnsemblQRFP - 9q34.12 [CytoView hg19]  QRFP - 9q34.12 [CytoView hg38]
Mapping of homologs : NCBIQRFP [Mapview hg19]  QRFP [Mapview hg38]
OMIM609795   
Gene and transcription
Genbank (Entrez)AB109625 BC101127 BC101128 CV575364 EU832764
RefSeq transcript (Entrez)NM_198180
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)QRFP
Cluster EST : UnigeneHs.660704 [ NCBI ]
CGAP (NCI)Hs.660704
Alternative Splicing GalleryENSG00000188710
Gene ExpressionQRFP [ NCBI-GEO ]   QRFP [ EBI - ARRAY_EXPRESS ]   QRFP [ SEEK ]   QRFP [ MEM ]
Gene Expression Viewer (FireBrowse)QRFP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)347148
GTEX Portal (Tissue expression)QRFP
Protein : pattern, domain, 3D structure
UniProt/SwissProtP83859   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP83859  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP83859
Splice isoforms : SwissVarP83859
PhosPhoSitePlusP83859
Domains : Interpro (EBI)P518   
Domain families : Pfam (Sanger)RFamide_26RFa (PF11109)   
Domain families : Pfam (NCBI)pfam11109   
Domain structure : Prodom (Prabi Lyon)PD786889 (PD786889)   
Conserved Domain (NCBI)QRFP
DMDM Disease mutations347148
Blocks (Seattle)QRFP
SuperfamilyP83859
Human Protein AtlasENSG00000188710
Peptide AtlasP83859
HPRD17813
IPIIPI00377074   
Protein Interaction databases
DIP (DOE-UCLA)P83859
IntAct (EBI)P83859
FunCoupENSG00000188710
BioGRIDQRFP
STRING (EMBL)QRFP
ZODIACQRFP
Ontologies - Pathways
QuickGOP83859
Ontology : AmiGOneuropeptide hormone activity  cellular_component  extracellular region  neuropeptide signaling pathway  grooming behavior  locomotory behavior  orexigenic neuropeptide QRFP receptor binding  positive regulation of blood pressure  regulation of feeding behavior  
Ontology : EGO-EBIneuropeptide hormone activity  cellular_component  extracellular region  neuropeptide signaling pathway  grooming behavior  locomotory behavior  orexigenic neuropeptide QRFP receptor binding  positive regulation of blood pressure  regulation of feeding behavior  
NDEx NetworkQRFP
Atlas of Cancer Signalling NetworkQRFP
Wikipedia pathwaysQRFP
Orthology - Evolution
OrthoDB347148
GeneTree (enSembl)ENSG00000188710
Phylogenetic Trees/Animal Genes : TreeFamQRFP
HOVERGENP83859
HOGENOMP83859
Homologs : HomoloGeneQRFP
Homology/Alignments : Family Browser (UCSC)QRFP
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerQRFP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)QRFP
dbVarQRFP
ClinVarQRFP
1000_GenomesQRFP 
Exome Variant ServerQRFP
ExAC (Exome Aggregation Consortium)QRFP (select the gene name)
Genetic variants : HAPMAP347148
Genomic Variants (DGV)QRFP [DGVbeta]
DECIPHERQRFP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisQRFP 
Mutations
ICGC Data PortalQRFP 
TCGA Data PortalQRFP 
Broad Tumor PortalQRFP
OASIS PortalQRFP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICQRFP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDQRFP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch QRFP
DgiDB (Drug Gene Interaction Database)QRFP
DoCM (Curated mutations)QRFP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)QRFP (select a term)
intoGenQRFP
Cancer3DQRFP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609795   
Orphanet
MedgenQRFP
Genetic Testing Registry QRFP
NextProtP83859 [Medical]
TSGene347148
GENETestsQRFP
Target ValidationQRFP
Huge Navigator QRFP [HugePedia]
snp3D : Map Gene to Disease347148
BioCentury BCIQQRFP
ClinGenQRFP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD347148
Chemical/Pharm GKB GenePA162400554
Clinical trialQRFP
Miscellaneous
canSAR (ICR)QRFP (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineQRFP
EVEXQRFP
GoPubMedQRFP
iHOPQRFP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Aug 1 17:12:12 CEST 2017

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