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QSER1 (glutamine and serine rich 1)

Identity

Alias_symbol (synonym)FLJ21924
Other alias-
HGNC (Hugo) QSER1
LocusID (NCBI) 79832
Atlas_Id 72444
Location 11p13  [Link to chromosome band 11p13]
Location_base_pair Starts at 32893178 and ends at 32980268 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ASH1L (1q22) / QSER1 (11p13)CERS6 (2q24.3) / QSER1 (11p13)QSER1 (11p13) / GAS2 (11p14.3)
QSER1 (11p13) / PRRG4 (11p13)QSER1 (11p13) / QSER1 (11p13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)QSER1   26154
Cards
Entrez_Gene (NCBI)QSER1  79832  glutamine and serine rich 1
Aliases
GeneCards (Weizmann)QSER1
Ensembl hg19 (Hinxton)ENSG00000060749 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000060749 [Gene_View]  chr11:32893178-32980268 [Contig_View]  QSER1 [Vega]
ICGC DataPortalENSG00000060749
TCGA cBioPortalQSER1
AceView (NCBI)QSER1
Genatlas (Paris)QSER1
WikiGenes79832
SOURCE (Princeton)QSER1
Genetics Home Reference (NIH)QSER1
Genomic and cartography
GoldenPath hg38 (UCSC)QSER1  -     chr11:32893178-32980268 +  11p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)QSER1  -     11p13   [Description]    (hg19-Feb_2009)
EnsemblQSER1 - 11p13 [CytoView hg19]  QSER1 - 11p13 [CytoView hg38]
Mapping of homologs : NCBIQSER1 [Mapview hg19]  QSER1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK025577 AK055185 AK095528 AK123858 AK125391
RefSeq transcript (Entrez)NM_001076786 NM_024774
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)QSER1
Cluster EST : UnigeneHs.369368 [ NCBI ]
CGAP (NCI)Hs.369368
Alternative Splicing GalleryENSG00000060749
Gene ExpressionQSER1 [ NCBI-GEO ]   QSER1 [ EBI - ARRAY_EXPRESS ]   QSER1 [ SEEK ]   QSER1 [ MEM ]
Gene Expression Viewer (FireBrowse)QSER1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79832
GTEX Portal (Tissue expression)QSER1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ2KHR3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ2KHR3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ2KHR3
Splice isoforms : SwissVarQ2KHR3
PhosPhoSitePlusQ2KHR3
Domains : Interpro (EBI)DUF4211   
Domain families : Pfam (Sanger)DUF4211 (PF13926)   
Domain families : Pfam (NCBI)pfam13926   
Conserved Domain (NCBI)QSER1
DMDM Disease mutations79832
Blocks (Seattle)QSER1
SuperfamilyQ2KHR3
Human Protein AtlasENSG00000060749
Peptide AtlasQ2KHR3
HPRD08645
IPIIPI00418991   IPI00847870   IPI00978561   IPI00981616   IPI00984458   
Protein Interaction databases
DIP (DOE-UCLA)Q2KHR3
IntAct (EBI)Q2KHR3
FunCoupENSG00000060749
BioGRIDQSER1
STRING (EMBL)QSER1
ZODIACQSER1
Ontologies - Pathways
QuickGOQ2KHR3
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkQSER1
Atlas of Cancer Signalling NetworkQSER1
Wikipedia pathwaysQSER1
Orthology - Evolution
OrthoDB79832
GeneTree (enSembl)ENSG00000060749
Phylogenetic Trees/Animal Genes : TreeFamQSER1
HOVERGENQ2KHR3
HOGENOMQ2KHR3
Homologs : HomoloGeneQSER1
Homology/Alignments : Family Browser (UCSC)QSER1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerQSER1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)QSER1
dbVarQSER1
ClinVarQSER1
1000_GenomesQSER1 
Exome Variant ServerQSER1
ExAC (Exome Aggregation Consortium)QSER1 (select the gene name)
Genetic variants : HAPMAP79832
Genomic Variants (DGV)QSER1 [DGVbeta]
DECIPHERQSER1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisQSER1 
Mutations
ICGC Data PortalQSER1 
TCGA Data PortalQSER1 
Broad Tumor PortalQSER1
OASIS PortalQSER1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICQSER1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDQSER1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch QSER1
DgiDB (Drug Gene Interaction Database)QSER1
DoCM (Curated mutations)QSER1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)QSER1 (select a term)
intoGenQSER1
Cancer3DQSER1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenQSER1
Genetic Testing Registry QSER1
NextProtQ2KHR3 [Medical]
TSGene79832
GENETestsQSER1
Target ValidationQSER1
Huge Navigator QSER1 [HugePedia]
snp3D : Map Gene to Disease79832
BioCentury BCIQQSER1
ClinGenQSER1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79832
Chemical/Pharm GKB GenePA143485589
Clinical trialQSER1
Miscellaneous
canSAR (ICR)QSER1 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineQSER1
EVEXQSER1
GoPubMedQSER1
iHOPQSER1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 16:36:58 CEST 2017

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