RAB11FIP4 (RAB11 family interacting protein 4)

2016-04-01  

Identity

HGNC
RAB11FIP4
LOCATION
17q11.2
LOCUSID
84440
ALIAS
FIP4-Rab11,RAB11-FIP4
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 84440
MIM: 611999
HGNC: 30267
Ensembl: ENSG00000131242

Variants:

dbSNP: 84440
ClinVar: 84440
TCGA: ENSG00000131242
COSMIC: RAB11FIP4

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000131242ENST00000394744Q86YS3
ENSG00000131242ENST00000578694J3QLM3
ENSG00000131242ENST00000579589K7EMK3
ENSG00000131242ENST00000582009J3QKR9
ENSG00000131242ENST00000583755K7EL58
ENSG00000131242ENST00000621161Q86YS3

Expression (GTEx)

0
10
20
30
40
50
60
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
EndocytosisKEGGko04144
EndocytosisKEGGhsa04144

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
161489472005Rab11-FIP3 and FIP4 interact with Arf6 and the exocyst to control membrane traffic in cytokinesis.127
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.62
128578742003Arfophilins are dual Arf/Rab 11 binding proteins that regulate recycling endosome distribution and are related to Drosophila nuclear fallout.53
124706452002Rab11-FIP4 interacts with Rab11 in a GTP-dependent manner and its overexpression condenses the Rab11 positive compartment in HeLa cells.24
257459952015Hypoxia upregulates Rab11-family interacting protein 4 through HIF-1α to promote the metastasis of hepatocellular carcinoma.12
280353752017High Rab11-FIP4 expression predicts poor prognosis and exhibits tumor promotion in pancreatic cancer.4
292573142018Hypoxia-induced Rab11-family interacting protein 4 expression promotes migration and invasion of colon cancer and correlates with poor prognosis.2

Citation

Dessen P

RAB11FIP4 (RAB11 family interacting protein 4)

Atlas Genet Cytogenet Oncol Haematol. 2016-04-01

Online version: http://atlasgeneticsoncology.org/gene/55694/rab11fip4