Atlas of Genetics and Cytogenetics in Oncology and Haematology


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RAB14 (RAB14, member RAS oncogene family)

Identity

Alias_symbol (synonym)FBP
RAB-14
Other alias
HGNC (Hugo) RAB14
LocusID (NCBI) 51552
Atlas_Id 41959
Location 9q33.2  [Link to chromosome band 9q33]
Location_base_pair Starts at 121178137 and ends at 121202087 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
FN3K (17q25.3) / RAB14 (9q33.2)PRR5 (22q13.31) / RAB14 (9q33.2)RAB14 (9q33.2) / RAB14 (9q33.2)
RAB14 (9q33.2) / STOM (9q33.2)RAB14 (9q33.2) / UBP1 (3p22.3)RAB14 (9q33.2) / ZHX2 (8q24.13)
RAB14 9q33.2 / STOM 9q33.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RAB14   16524
Cards
Entrez_Gene (NCBI)RAB14  51552  RAB14, member RAS oncogene family
AliasesFBP; RAB-14
GeneCards (Weizmann)RAB14
Ensembl hg19 (Hinxton)ENSG00000119396 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000119396 [Gene_View]  chr9:121178137-121202087 [Contig_View]  RAB14 [Vega]
ICGC DataPortalENSG00000119396
TCGA cBioPortalRAB14
AceView (NCBI)RAB14
Genatlas (Paris)RAB14
WikiGenes51552
SOURCE (Princeton)RAB14
Genetics Home Reference (NIH)RAB14
Genomic and cartography
GoldenPath hg38 (UCSC)RAB14  -     chr9:121178137-121202087 -  9q33.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RAB14  -     9q33.2   [Description]    (hg19-Feb_2009)
EnsemblRAB14 - 9q33.2 [CytoView hg19]  RAB14 - 9q33.2 [CytoView hg38]
Mapping of homologs : NCBIRAB14 [Mapview hg19]  RAB14 [Mapview hg38]
OMIM612673   
Gene and transcription
Genbank (Entrez)AF052113 AF112206 AF152463 AF203689 AF498949
RefSeq transcript (Entrez)NM_016322
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RAB14
Cluster EST : UnigeneHs.371563 [ NCBI ]
CGAP (NCI)Hs.371563
Alternative Splicing GalleryENSG00000119396
Gene ExpressionRAB14 [ NCBI-GEO ]   RAB14 [ EBI - ARRAY_EXPRESS ]   RAB14 [ SEEK ]   RAB14 [ MEM ]
Gene Expression Viewer (FireBrowse)RAB14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51552
GTEX Portal (Tissue expression)RAB14
Human Protein AtlasENSG00000119396-RAB14 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP61106   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP61106  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP61106
Splice isoforms : SwissVarP61106
PhosPhoSitePlusP61106
Domaine pattern : Prosite (Expaxy)RAB (PS51419)   
Domains : Interpro (EBI)P-loop_NTPase    Rab14    Small_GTP-bd_dom    Small_GTPase   
Domain families : Pfam (Sanger)Ras (PF00071)   
Domain families : Pfam (NCBI)pfam00071   
Conserved Domain (NCBI)RAB14
DMDM Disease mutations51552
Blocks (Seattle)RAB14
PDB (SRS)1Z0F    4D0G    4DRZ   
PDB (PDBSum)1Z0F    4D0G    4DRZ   
PDB (IMB)1Z0F    4D0G    4DRZ   
PDB (RSDB)1Z0F    4D0G    4DRZ   
Structural Biology KnowledgeBase1Z0F    4D0G    4DRZ   
SCOP (Structural Classification of Proteins)1Z0F    4D0G    4DRZ   
CATH (Classification of proteins structures)1Z0F    4D0G    4DRZ   
SuperfamilyP61106
Human Protein Atlas [tissue]ENSG00000119396-RAB14 [tissue]
Peptide AtlasP61106
HPRD06693
IPIIPI00291928   IPI00646415   
Protein Interaction databases
DIP (DOE-UCLA)P61106
IntAct (EBI)P61106
FunCoupENSG00000119396
BioGRIDRAB14
STRING (EMBL)RAB14
ZODIACRAB14
Ontologies - Pathways
QuickGOP61106
Ontology : AmiGOGolgi membrane  GTPase activity  GTPase activity  GTPase activity  protein binding  GTP binding  intracellular  lysosome  lysosomal membrane  early endosome  late endosome  rough endoplasmic reticulum  Golgi stack  trans-Golgi network  cytosol  cytosol  plasma membrane  plasma membrane  cilium  phosphatidylinositol biosynthetic process  Golgi to endosome transport  Golgi to endosome transport  fibroblast growth factor receptor signaling pathway  embryo development  protein transport  vesicle-mediated transport  GDP binding  regulation of endocytosis  trans-Golgi network transport vesicle  cytoplasmic vesicle membrane  myosin V binding  early endosome membrane  endocytic recycling  regulation of protein localization  nuclear outer membrane-endoplasmic reticulum membrane network  defense response to bacterium  intracellular membrane-bounded organelle  neutrophil degranulation  phagocytic vesicle  intracellular transport  perinuclear region of cytoplasm  recycling endosome  recycling endosome membrane  membrane organization  extracellular exosome  tertiary granule membrane  phagosome maturation  
Ontology : EGO-EBIGolgi membrane  GTPase activity  GTPase activity  GTPase activity  protein binding  GTP binding  intracellular  lysosome  lysosomal membrane  early endosome  late endosome  rough endoplasmic reticulum  Golgi stack  trans-Golgi network  cytosol  cytosol  plasma membrane  plasma membrane  cilium  phosphatidylinositol biosynthetic process  Golgi to endosome transport  Golgi to endosome transport  fibroblast growth factor receptor signaling pathway  embryo development  protein transport  vesicle-mediated transport  GDP binding  regulation of endocytosis  trans-Golgi network transport vesicle  cytoplasmic vesicle membrane  myosin V binding  early endosome membrane  endocytic recycling  regulation of protein localization  nuclear outer membrane-endoplasmic reticulum membrane network  defense response to bacterium  intracellular membrane-bounded organelle  neutrophil degranulation  phagocytic vesicle  intracellular transport  perinuclear region of cytoplasm  recycling endosome  recycling endosome membrane  membrane organization  extracellular exosome  tertiary granule membrane  phagosome maturation  
NDEx NetworkRAB14
Atlas of Cancer Signalling NetworkRAB14
Wikipedia pathwaysRAB14
Orthology - Evolution
OrthoDB51552
GeneTree (enSembl)ENSG00000119396
Phylogenetic Trees/Animal Genes : TreeFamRAB14
HOVERGENP61106
HOGENOMP61106
Homologs : HomoloGeneRAB14
Homology/Alignments : Family Browser (UCSC)RAB14
Gene fusions - Rearrangements
Fusion : MitelmanRAB14/STOM [9q33.2/9q33.2]  
Fusion: TCGA_MDACCRAB14 9q33.2 STOM 9q33.2 LUAD
Tumor Fusion PortalRAB14
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRAB14 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RAB14
dbVarRAB14
ClinVarRAB14
1000_GenomesRAB14 
Exome Variant ServerRAB14
ExAC (Exome Aggregation Consortium)ENSG00000119396
GNOMAD BrowserENSG00000119396
Genetic variants : HAPMAP51552
Genomic Variants (DGV)RAB14 [DGVbeta]
DECIPHERRAB14 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRAB14 
Mutations
ICGC Data PortalRAB14 
TCGA Data PortalRAB14 
Broad Tumor PortalRAB14
OASIS PortalRAB14 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRAB14  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRAB14
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RAB14
DgiDB (Drug Gene Interaction Database)RAB14
DoCM (Curated mutations)RAB14 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RAB14 (select a term)
intoGenRAB14
Cancer3DRAB14(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612673   
Orphanet
DisGeNETRAB14
MedgenRAB14
Genetic Testing Registry RAB14
NextProtP61106 [Medical]
TSGene51552
GENETestsRAB14
Target ValidationRAB14
Huge Navigator RAB14 [HugePedia]
snp3D : Map Gene to Disease51552
BioCentury BCIQRAB14
ClinGenRAB14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51552
Chemical/Pharm GKB GenePA34104
Clinical trialRAB14
Miscellaneous
canSAR (ICR)RAB14 (select the gene name)
Probes
Litterature
PubMed62 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRAB14
EVEXRAB14
GoPubMedRAB14
iHOPRAB14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:31:14 CET 2017

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