Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

RAB14 (RAB14, member RAS oncogene family)

Identity

Alias_symbol (synonym)FBP
RAB-14
Other alias
HGNC (Hugo) RAB14
LocusID (NCBI) 51552
Atlas_Id 41959
Location 9q33.2  [Link to chromosome band 9q33]
Location_base_pair Starts at 123940415 and ends at 123964365 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
FN3K (17q25.3) / RAB14 (9q33.2)PRR5 (22q13.31) / RAB14 (9q33.2)RAB14 (9q33.2) / RAB14 (9q33.2)
RAB14 (9q33.2) / STOM (9q33.2)RAB14 (9q33.2) / UBP1 (3p22.3)RAB14 (9q33.2) / ZHX2 (8q24.13)
RAB14 9q33.2 / STOM 9q33.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RAB14   16524
Cards
Entrez_Gene (NCBI)RAB14  51552  RAB14, member RAS oncogene family
AliasesFBP; RAB-14
GeneCards (Weizmann)RAB14
Ensembl hg19 (Hinxton)ENSG00000119396 [Gene_View]  chr9:123940415-123964365 [Contig_View]  RAB14 [Vega]
Ensembl hg38 (Hinxton)ENSG00000119396 [Gene_View]  chr9:123940415-123964365 [Contig_View]  RAB14 [Vega]
ICGC DataPortalENSG00000119396
TCGA cBioPortalRAB14
AceView (NCBI)RAB14
Genatlas (Paris)RAB14
WikiGenes51552
SOURCE (Princeton)RAB14
Genetics Home Reference (NIH)RAB14
Genomic and cartography
GoldenPath hg19 (UCSC)RAB14  -     chr9:123940415-123964365 -  9q33.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)RAB14  -     9q33.2   [Description]    (hg38-Dec_2013)
EnsemblRAB14 - 9q33.2 [CytoView hg19]  RAB14 - 9q33.2 [CytoView hg38]
Mapping of homologs : NCBIRAB14 [Mapview hg19]  RAB14 [Mapview hg38]
OMIM612673   
Gene and transcription
Genbank (Entrez)AF052113 AF112206 AF152463 AF203689 AF498949
RefSeq transcript (Entrez)NM_016322
RefSeq genomic (Entrez)NC_000009 NC_018920 NT_008470 NW_004929366
Consensus coding sequences : CCDS (NCBI)RAB14
Cluster EST : UnigeneHs.371563 [ NCBI ]
CGAP (NCI)Hs.371563
Alternative Splicing GalleryENSG00000119396
Gene ExpressionRAB14 [ NCBI-GEO ]   RAB14 [ EBI - ARRAY_EXPRESS ]   RAB14 [ SEEK ]   RAB14 [ MEM ]
Gene Expression Viewer (FireBrowse)RAB14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51552
GTEX Portal (Tissue expression)RAB14
Protein : pattern, domain, 3D structure
UniProt/SwissProtP61106   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP61106  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP61106
Splice isoforms : SwissVarP61106
PhosPhoSitePlusP61106
Domaine pattern : Prosite (Expaxy)RAB (PS51419)   
Domains : Interpro (EBI)P-loop_NTPase    Rab14    Small_GTP-bd_dom    Small_GTPase    Small_GTPase_Rab_type   
Domain families : Pfam (Sanger)Ras (PF00071)   
Domain families : Pfam (NCBI)pfam00071   
Domain families : Smart (EMBL)RAB (SM00175)  
Conserved Domain (NCBI)RAB14
DMDM Disease mutations51552
Blocks (Seattle)RAB14
PDB (SRS)1Z0F    4D0G    4DRZ   
PDB (PDBSum)1Z0F    4D0G    4DRZ   
PDB (IMB)1Z0F    4D0G    4DRZ   
PDB (RSDB)1Z0F    4D0G    4DRZ   
Structural Biology KnowledgeBase1Z0F    4D0G    4DRZ   
SCOP (Structural Classification of Proteins)1Z0F    4D0G    4DRZ   
CATH (Classification of proteins structures)1Z0F    4D0G    4DRZ   
SuperfamilyP61106
Human Protein AtlasENSG00000119396
Peptide AtlasP61106
HPRD06693
IPIIPI00291928   IPI00646415   
Protein Interaction databases
DIP (DOE-UCLA)P61106
IntAct (EBI)P61106
FunCoupENSG00000119396
BioGRIDRAB14
STRING (EMBL)RAB14
ZODIACRAB14
Ontologies - Pathways
QuickGOP61106
Ontology : AmiGOGolgi membrane  glycoprotein binding  GTPase activity  GTPase activity  GTPase activity  protein binding  GTP binding  intracellular  lysosome  lysosomal membrane  early endosome  early endosome  late endosome  rough endoplasmic reticulum  Golgi apparatus  Golgi stack  trans-Golgi network  cytosol  plasma membrane  intracellular protein transport  Golgi to endosome transport  Golgi to endosome transport  nucleocytoplasmic transport  small GTPase mediated signal transduction  body fluid secretion  metabolic process  fibroblast growth factor receptor signaling pathway  embryo development  vesicle-mediated transport  apical plasma membrane  GDP binding  trans-Golgi network transport vesicle  cytoplasmic vesicle membrane  myosin V binding  early endosome membrane  endocytic recycling  regulation of protein localization  nuclear outer membrane-endoplasmic reticulum membrane network  defense response to bacterium  intracellular membrane-bounded organelle  apical protein localization  phagocytic vesicle  intracellular transport  perinuclear region of cytoplasm  recycling endosome  membrane organization  extracellular exosome  primary cilium  phagolysosome assembly involved in apoptotic cell clearance  alveolar lamellar body  
Ontology : EGO-EBIGolgi membrane  glycoprotein binding  GTPase activity  GTPase activity  GTPase activity  protein binding  GTP binding  intracellular  lysosome  lysosomal membrane  early endosome  early endosome  late endosome  rough endoplasmic reticulum  Golgi apparatus  Golgi stack  trans-Golgi network  cytosol  plasma membrane  intracellular protein transport  Golgi to endosome transport  Golgi to endosome transport  nucleocytoplasmic transport  small GTPase mediated signal transduction  body fluid secretion  metabolic process  fibroblast growth factor receptor signaling pathway  embryo development  vesicle-mediated transport  apical plasma membrane  GDP binding  trans-Golgi network transport vesicle  cytoplasmic vesicle membrane  myosin V binding  early endosome membrane  endocytic recycling  regulation of protein localization  nuclear outer membrane-endoplasmic reticulum membrane network  defense response to bacterium  intracellular membrane-bounded organelle  apical protein localization  phagocytic vesicle  intracellular transport  perinuclear region of cytoplasm  recycling endosome  membrane organization  extracellular exosome  primary cilium  phagolysosome assembly involved in apoptotic cell clearance  alveolar lamellar body  
NDEx NetworkRAB14
Atlas of Cancer Signalling NetworkRAB14
Wikipedia pathwaysRAB14
Orthology - Evolution
OrthoDB51552
GeneTree (enSembl)ENSG00000119396
Phylogenetic Trees/Animal Genes : TreeFamRAB14
HOVERGENP61106
HOGENOMP61106
Homologs : HomoloGeneRAB14
Homology/Alignments : Family Browser (UCSC)RAB14
Gene fusions - Rearrangements
Fusion : MitelmanRAB14/STOM [9q33.2/9q33.2]  
Fusion: TCGARAB14 9q33.2 STOM 9q33.2 LUAD
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRAB14 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RAB14
dbVarRAB14
ClinVarRAB14
1000_GenomesRAB14 
Exome Variant ServerRAB14
ExAC (Exome Aggregation Consortium)RAB14 (select the gene name)
Genetic variants : HAPMAP51552
Genomic Variants (DGV)RAB14 [DGVbeta]
DECIPHER (Syndromes)9:123940415-123964365  ENSG00000119396
CONAN: Copy Number AnalysisRAB14 
Mutations
ICGC Data PortalRAB14 
TCGA Data PortalRAB14 
Broad Tumor PortalRAB14
OASIS PortalRAB14 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRAB14  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRAB14
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RAB14
DgiDB (Drug Gene Interaction Database)RAB14
DoCM (Curated mutations)RAB14 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RAB14 (select a term)
intoGenRAB14
Cancer3DRAB14(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612673   
Orphanet
MedgenRAB14
Genetic Testing Registry RAB14
NextProtP61106 [Medical]
TSGene51552
GENETestsRAB14
Huge Navigator RAB14 [HugePedia]
snp3D : Map Gene to Disease51552
BioCentury BCIQRAB14
ClinGenRAB14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51552
Chemical/Pharm GKB GenePA34104
Clinical trialRAB14
Miscellaneous
canSAR (ICR)RAB14 (select the gene name)
Probes
Litterature
PubMed61 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRAB14
EVEXRAB14
GoPubMedRAB14
iHOPRAB14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Mar 30 15:16:26 CEST 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.