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RAB26 (RAB26, member RAS oncogene family)

Identity

Other aliasV46133
HGNC (Hugo) RAB26
LocusID (NCBI) 25837
Atlas_Id 41971
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 2148144 and ends at 2154161 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
RAB26 (16p13.3) / E4F1 (16p13.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RAB26   14259
Cards
Entrez_Gene (NCBI)RAB26  25837  RAB26, member RAS oncogene family
AliasesV46133
GeneCards (Weizmann)RAB26
Ensembl hg19 (Hinxton)ENSG00000167964 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000167964 [Gene_View]  chr16:2148144-2154161 [Contig_View]  RAB26 [Vega]
ICGC DataPortalENSG00000167964
TCGA cBioPortalRAB26
AceView (NCBI)RAB26
Genatlas (Paris)RAB26
WikiGenes25837
SOURCE (Princeton)RAB26
Genetics Home Reference (NIH)RAB26
Genomic and cartography
GoldenPath hg38 (UCSC)RAB26  -     chr16:2148144-2154161 +  16p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RAB26  -     16p13.3   [Description]    (hg19-Feb_2009)
EnsemblRAB26 - 16p13.3 [CytoView hg19]  RAB26 - 16p13.3 [CytoView hg38]
Mapping of homologs : NCBIRAB26 [Mapview hg19]  RAB26 [Mapview hg38]
OMIM605455   
Gene and transcription
Genbank (Entrez)AB027137 AF498952 AK308560 AK309666 AK314110
RefSeq transcript (Entrez)NM_001308053 NM_014353
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RAB26
Cluster EST : UnigeneHs.3797 [ NCBI ]
CGAP (NCI)Hs.3797
Alternative Splicing GalleryENSG00000167964
Gene ExpressionRAB26 [ NCBI-GEO ]   RAB26 [ EBI - ARRAY_EXPRESS ]   RAB26 [ SEEK ]   RAB26 [ MEM ]
Gene Expression Viewer (FireBrowse)RAB26 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)25837
GTEX Portal (Tissue expression)RAB26
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9ULW5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9ULW5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9ULW5
Splice isoforms : SwissVarQ9ULW5
PhosPhoSitePlusQ9ULW5
Domaine pattern : Prosite (Expaxy)RAB (PS51419)   
Domains : Interpro (EBI)P-loop_NTPase    Small_GTP-bd_dom    Small_GTPase   
Domain families : Pfam (Sanger)Ras (PF00071)   
Domain families : Pfam (NCBI)pfam00071   
Conserved Domain (NCBI)RAB26
DMDM Disease mutations25837
Blocks (Seattle)RAB26
PDB (SRS)2G6B   
PDB (PDBSum)2G6B   
PDB (IMB)2G6B   
PDB (RSDB)2G6B   
Structural Biology KnowledgeBase2G6B   
SCOP (Structural Classification of Proteins)2G6B   
CATH (Classification of proteins structures)2G6B   
SuperfamilyQ9ULW5
Human Protein AtlasENSG00000167964
Peptide AtlasQ9ULW5
HPRD05676
IPIIPI00419883   IPI01011362   
Protein Interaction databases
DIP (DOE-UCLA)Q9ULW5
IntAct (EBI)Q9ULW5
FunCoupENSG00000167964
BioGRIDRAB26
STRING (EMBL)RAB26
ZODIACRAB26
Ontologies - Pathways
QuickGOQ9ULW5
Ontology : AmiGOGolgi membrane  GTPase activity  protein binding  GTP binding  GTP binding  endosome  plasma membrane  vesicle docking involved in exocytosis  synaptic vesicle  protein secretion  regulation of exocytosis  GMP binding  transport vesicle membrane  secretory granule membrane  intrinsic component of plasma membrane  exocrine system development  exocrine system development  Golgi to plasma membrane protein transport  regulated exocytosis  
Ontology : EGO-EBIGolgi membrane  GTPase activity  protein binding  GTP binding  GTP binding  endosome  plasma membrane  vesicle docking involved in exocytosis  synaptic vesicle  protein secretion  regulation of exocytosis  GMP binding  transport vesicle membrane  secretory granule membrane  intrinsic component of plasma membrane  exocrine system development  exocrine system development  Golgi to plasma membrane protein transport  regulated exocytosis  
NDEx NetworkRAB26
Atlas of Cancer Signalling NetworkRAB26
Wikipedia pathwaysRAB26
Orthology - Evolution
OrthoDB25837
GeneTree (enSembl)ENSG00000167964
Phylogenetic Trees/Animal Genes : TreeFamRAB26
HOVERGENQ9ULW5
HOGENOMQ9ULW5
Homologs : HomoloGeneRAB26
Homology/Alignments : Family Browser (UCSC)RAB26
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRAB26 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RAB26
dbVarRAB26
ClinVarRAB26
1000_GenomesRAB26 
Exome Variant ServerRAB26
ExAC (Exome Aggregation Consortium)RAB26 (select the gene name)
Genetic variants : HAPMAP25837
Genomic Variants (DGV)RAB26 [DGVbeta]
DECIPHERRAB26 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRAB26 
Mutations
ICGC Data PortalRAB26 
TCGA Data PortalRAB26 
Broad Tumor PortalRAB26
OASIS PortalRAB26 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRAB26  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRAB26
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RAB26
DgiDB (Drug Gene Interaction Database)RAB26
DoCM (Curated mutations)RAB26 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RAB26 (select a term)
intoGenRAB26
Cancer3DRAB26(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605455   
Orphanet
MedgenRAB26
Genetic Testing Registry RAB26
NextProtQ9ULW5 [Medical]
TSGene25837
GENETestsRAB26
Target ValidationRAB26
Huge Navigator RAB26 [HugePedia]
snp3D : Map Gene to Disease25837
BioCentury BCIQRAB26
ClinGenRAB26
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD25837
Chemical/Pharm GKB GenePA34116
Clinical trialRAB26
Miscellaneous
canSAR (ICR)RAB26 (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRAB26
EVEXRAB26
GoPubMedRAB26
iHOPRAB26
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:27:33 CEST 2017

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