Atlas of Genetics and Cytogenetics in Oncology and Haematology


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RAB30-AS1 (RAB30 antisense RNA 1 (head to head))

Identity

Other alias-
HGNC (Hugo) RAB30-AS1
LocusID (NCBI) 100506233
Atlas_Id 72454
Location 11q14.1  [Link to chromosome band 11q14]
Location_base_pair Starts at 83072066 and ends at 83073712 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RAB30-AS1   48672
Cards
Entrez_Gene (NCBI)RAB30-AS1  100506233  RAB30 antisense RNA 1 (head to head)
Aliases
GeneCards (Weizmann)RAB30-AS1
Ensembl hg19 (Hinxton)ENSG00000246067 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000246067 [Gene_View]  chr11:83072066-83073712 [Contig_View]  RAB30-AS1 [Vega]
ICGC DataPortalENSG00000246067
TCGA cBioPortalRAB30-AS1
AceView (NCBI)RAB30-AS1
Genatlas (Paris)RAB30-AS1
WikiGenes100506233
SOURCE (Princeton)RAB30-AS1
Genetics Home Reference (NIH)RAB30-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)RAB30-AS1  -     chr11:83072066-83073712 +  11q14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RAB30-AS1  -     11q14.1   [Description]    (hg19-Feb_2009)
EnsemblRAB30-AS1 - 11q14.1 [CytoView hg19]  RAB30-AS1 - 11q14.1 [CytoView hg38]
Mapping of homologs : NCBIRAB30-AS1 [Mapview hg19]  RAB30-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI628578 BC031316 BU664621
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RAB30-AS1
Cluster EST : UnigeneHs.503429 [ NCBI ]
CGAP (NCI)Hs.503429
Alternative Splicing GalleryENSG00000246067
Gene ExpressionRAB30-AS1 [ NCBI-GEO ]   RAB30-AS1 [ EBI - ARRAY_EXPRESS ]   RAB30-AS1 [ SEEK ]   RAB30-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)RAB30-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506233
GTEX Portal (Tissue expression)RAB30-AS1
Human Protein AtlasENSG00000246067-RAB30-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RAB30-AS1
DMDM Disease mutations100506233
Blocks (Seattle)RAB30-AS1
Human Protein Atlas [tissue]ENSG00000246067-RAB30-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000246067
BioGRIDRAB30-AS1
STRING (EMBL)RAB30-AS1
ZODIACRAB30-AS1
Ontologies - Pathways
Huge Navigator RAB30-AS1 [HugePedia]
snp3D : Map Gene to Disease100506233
BioCentury BCIQRAB30-AS1
ClinGenRAB30-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506233
Clinical trialRAB30-AS1
Miscellaneous
canSAR (ICR)RAB30-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRAB30-AS1
EVEXRAB30-AS1
GoPubMedRAB30-AS1
iHOPRAB30-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:25:04 CET 2017

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