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RAB31 (RAB31, member RAS oncogene family)

Identity

Other namesRab22B
HGNC (Hugo) RAB31
LocusID (NCBI) 11031
Location 18p11.22
Location_base_pair Starts at 9708228 and ends at 9862553 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)RAB31   9771
Entrez_Gene (NCBI)RAB31  11031  RAB31, member RAS oncogene family
Cards
GeneCards (Weizmann)RAB31
Ensembl (Hinxton)ENSG00000168461 [Gene_View]  chr18:9708228-9862553 [Contig_View]  RAB31 [Vega]
AceView (NCBI)RAB31
Genatlas (Paris)RAB31
SOURCE (Stanford)NM_006868
Genomic and cartography
GoldenPath (UCSC)RAB31  -  18p11.22   chr18:9708228-9862553 +  18p11.22   [Description]    (hg19-Feb_2009)
EnsemblRAB31 - 18p11.22 [CytoView]
Mapping of homologs : NCBIRAB31 [Mapview]
OMIM605694   
Gene and transcription
Genbank (Entrez)AF183421 AF234995 AF498957 AI198863 AK223505
RefSeq transcript (SRS)NM_006868
RefSeq transcript (Entrez)NM_006868
RefSeq genomic (SRS)AC_000150 NC_000018 NC_018929 NT_010859 NW_001838461 NW_004078094
RefSeq genomic (Entrez)AC_000150 NC_000018 NC_018929 NT_010859 NW_001838461 NW_004078094
Consensus coding sequences : CCDS (NCBI)RAB31
Cluster EST : UnigeneHs.744887 [ SRS ] Hs.744887 [ NCBI ]
CGAP (NCI)Hs.744887
Alternative Splicing : Fast-db (Paris)GSHG0013913
Alternative Splicing GalleryENSG00000168461
Gene ExpressionRAB31 [ NCBI-GEO ]   RAB31 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ13636 (SRS) Q13636 (Uniprot)
NextProtQ13636
With graphics : InterProQ13636
Splice isoforms : SwissVarQ13636(Swissvar)
Domaine pattern : Prosite (SRS)RAB (PS51419)   
Domaine pattern : Prosite (Expaxy)RAB (PS51419)   
Domains : Interpro (SRS)Small_GTP-bd_dom    Small_GTPase    Small_GTPase_Rab_type   
Domains : Interpro (EBI)Small_GTP-bd_dom    Small_GTPase    Small_GTPase_Rab_type   
Related proteins : CluSTrQ13636
Domain families : Pfam (SRS)Ras (PF00071)   
Domain families : Pfam (Sanger)Ras (PF00071)   
Domain families : Pfam (NCBI)pfam00071   
Domain families : Smart (EMBL)RAB (SM00175)  
DMDM11031
Blocks (Seattle)Q13636
PDB (SRS)2FG5   
PDB (PDBSum)2FG5   
PDB (IMB)2FG5   
PDB (RSDB)2FG5   
Human Protein AtlasENSG00000168461
HPRD05751
IPIIPI00646692   IPI00014376   
Protein Interaction databases
DIP (DOE-UCLA)Q13636
IntAct (EBI)Q13636
FunCoupENSG00000168461
REACTOMERAB31
Protein Interaction Database11031
BioGRIDRAB31
InParanoidQ13636
Interologous Interaction database Q13636
IntegromeDBRAB31
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)RAB31
SNP (GeneSNP Utah)RAB31
SNP : HGBaseRAB31
Genetic variants : HAPMAPRAB31
Somatic Mutations in Cancer : COSMICRAB31 
CONAN: Copy Number AnalysisRAB31 
Mutations and Diseases : HGMDRAB31
OMIM605694   
GENETests605694   
Disease Genetic AssociationRAB31
Huge Navigator RAB31 [HugePedia]  RAB31 [HugeCancerGEM]
Genomic VariantsRAB31  RAB31 [DGVbeta]
ClinVarRAB31
snp3D : Map Gene to Disease11031
General knowledge
Homologs : HomoloGeneRAB31
Homology/Alignments : Family Browser (UCSC)RAB31
Phylogenetic Trees/Animal Genes : TreeFamRAB31
Chemical/Protein Interactions : CTD11031
Chemical/Pharm GKB GenePA34122
Clinical trialRAB31
Cancer Resource (Charite)ENSG00000168461
Ontology : AmiGOGTPase activity  GTP binding  early endosome  Golgi apparatus  GTP catabolic process  small GTPase mediated signal transduction  GDP binding  phagocytic vesicle membrane  receptor internalization  trans-Golgi network membrane  cellular response to insulin stimulus  Golgi to plasma membrane protein transport  regulated secretory pathway  phagocytic vesicle  phagosome maturation  
Ontology : EGO-EBIGTPase activity  GTP binding  early endosome  Golgi apparatus  GTP catabolic process  small GTPase mediated signal transduction  GDP binding  phagocytic vesicle membrane  receptor internalization  trans-Golgi network membrane  cellular response to insulin stimulus  Golgi to plasma membrane protein transport  regulated secretory pathway  phagocytic vesicle  phagosome maturation  
Other databases
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
PubGeneRAB31
iHOPRAB31
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 14 17:38:52 CEST 2013
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