Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

RAB33A (RAB33A, member RAS oncogene family)

Identity

Other namesRabS10
HGNC (Hugo) RAB33A
LocusID (NCBI) 9363
Location Xq26.1
Location_base_pair Starts at 129305773 and ends at 129318844 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)RAB33A   9773
Entrez_Gene (NCBI)RAB33A  9363  RAB33A, member RAS oncogene family
Cards
GeneCards (Weizmann)RAB33A
Ensembl (Hinxton)ENSG00000134594 [Gene_View]  chrX:129305773-129318844 [Contig_View]  RAB33A [Vega]
AceView (NCBI)RAB33A
Genatlas (Paris)RAB33A
SOURCE (Stanford)NM_004794
Genomic and cartography
GoldenPath (UCSC)RAB33A  -  Xq26.1   chrX:129305773-129318844 +  Xq26.1   [Description]    (hg19-Feb_2009)
EnsemblRAB33A - Xq26.1 [CytoView]
Mapping of homologs : NCBIRAB33A [Mapview]
OMIM300333   
Gene and transcription
Genbank (Entrez)AF498959 AK094927 BC001157 BC001704 BC009996
RefSeq transcript (SRS)NM_004794
RefSeq transcript (Entrez)NM_004794
RefSeq genomic (SRS)AC_000155 NC_000023 NC_018934 NG_012558 NT_011786 NW_001842398 NW_004078125
RefSeq genomic (Entrez)AC_000155 NC_000023 NC_018934 NG_012558 NT_011786 NW_001842398 NW_004078125
Consensus coding sequences : CCDS (NCBI)RAB33A
Cluster EST : UnigeneHs.654356 [ SRS ] Hs.654356 [ NCBI ]
CGAP (NCI)Hs.654356
Alternative Splicing : Fast-db (Paris)GSHG0031809
Alternative Splicing GalleryENSG00000134594
Gene ExpressionRAB33A [ NCBI-GEO ]   RAB33A [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14088 (SRS) Q14088 (Uniprot)
NextProtQ14088
With graphics : InterProQ14088
Splice isoforms : SwissVarQ14088(Swissvar)
Domaine pattern : Prosite (SRS)RAB (PS51419)   
Domaine pattern : Prosite (Expaxy)RAB (PS51419)   
Domains : Interpro (SRS)Small_GTP-bd_dom    Small_GTPase    Small_GTPase_Rab_type   
Domains : Interpro (EBI)Small_GTP-bd_dom    Small_GTPase    Small_GTPase_Rab_type   
Related proteins : CluSTrQ14088
Domain families : Pfam (SRS)Ras (PF00071)   
Domain families : Pfam (Sanger)Ras (PF00071)   
Domain families : Pfam (NCBI)pfam00071   
Domain families : Smart (EMBL)RAB (SM00175)  
DMDM9363
Blocks (Seattle)Q14088
Human Protein AtlasENSG00000134594
HPRD02272
IPIIPI00028517   
Protein Interaction databases
DIP (DOE-UCLA)Q14088
IntAct (EBI)Q14088
FunCoupENSG00000134594
REACTOMERAB33A
Protein Interaction Database9363
BioGRIDRAB33A
InParanoidQ14088
Interologous Interaction database Q14088
IntegromeDBRAB33A
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)RAB33A
SNP (GeneSNP Utah)RAB33A
SNP : HGBaseRAB33A
Genetic variants : HAPMAPRAB33A
Somatic Mutations in Cancer : COSMICRAB33A 
CONAN: Copy Number AnalysisRAB33A 
Mutations and Diseases : HGMDRAB33A
OMIM300333   
GENETests300333   
Disease Genetic AssociationRAB33A
Huge Navigator RAB33A [HugePedia]  RAB33A [HugeCancerGEM]
Genomic VariantsRAB33A  RAB33A [DGVbeta]
ClinVarRAB33A
snp3D : Map Gene to Disease9363
General knowledge
Homologs : HomoloGeneRAB33A
Homology/Alignments : Family Browser (UCSC)RAB33A
Phylogenetic Trees/Animal Genes : TreeFamRAB33A
Chemical/Protein Interactions : CTD9363
Chemical/Pharm GKB GenePA34124
Clinical trialRAB33A
Cancer Resource (Charite)ENSG00000134594
Ontology : AmiGOGTPase activity  protein binding  GTP binding  plasma membrane  GTP catabolic process  small GTPase mediated signal transduction  protein transport  
Ontology : EGO-EBIGTPase activity  protein binding  GTP binding  plasma membrane  GTP catabolic process  small GTPase mediated signal transduction  protein transport  
Other databases
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
PubGeneRAB33A
iHOPRAB33A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 14 17:30:15 CEST 2013
Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.