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RAB3IP (RAB3A interacting protein)

Identity

Alias (NCBI)RABIN3
RABIN8
HGNC (Hugo) RAB3IP
HGNC Alias symbRABIN3
FLJ22548
RABIN8
HGNC Alias namerabin3
LocusID (NCBI) 117177
Atlas_Id 43670
Location 12q15  [Link to chromosome band 12q15]
Location_base_pair Starts at 69739381 and ends at 69823199 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CNOT2 (12q15) / RAB3IP (12q15)OSBPL8 (12q21.2) / RAB3IP (12q15)RAB3IP (12q15) / FRS2 (12q15)
RAB3IP (12q15) / NUP107 (12q15)RAB3IP (12q15) / RAB3IP (12q15)RAB3IP (12q15) / SEMA5B (3q21.1)
SLC2A13 (12q12) / RAB3IP (12q15)CNOT2 12q15 / RAB3IP 12q15OSBPL8 12q21.2 / RAB3IP 12q15
RAB3IP 12q15 / FRS2 12q15RAB3IP 12q15 / NUP107 12q15SLC2A13 12q12 / RAB3IP 12q15

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)RAB3IP   16508
Cards
Entrez_Gene (NCBI)RAB3IP    RAB3A interacting protein
AliasesRABIN3; RABIN8
GeneCards (Weizmann)RAB3IP
Ensembl hg19 (Hinxton)ENSG00000127328 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000127328 [Gene_View]  ENSG00000127328 [Sequence]  chr12:69739381-69823199 [Contig_View]  RAB3IP [Vega]
ICGC DataPortalENSG00000127328
TCGA cBioPortalRAB3IP
AceView (NCBI)RAB3IP
Genatlas (Paris)RAB3IP
SOURCE (Princeton)RAB3IP
Genetics Home Reference (NIH)RAB3IP
Genomic and cartography
GoldenPath hg38 (UCSC)RAB3IP  -     chr12:69739381-69823199 +  12q15   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RAB3IP  -     12q15   [Description]    (hg19-Feb_2009)
GoldenPathRAB3IP - 12q15 [CytoView hg19]  RAB3IP - 12q15 [CytoView hg38]
ImmunoBaseENSG00000127328
Genome Data Viewer NCBIRAB3IP [Mapview hg19]  
OMIM608686   
Gene and transcription
Genbank (Entrez)AI912718 AJ312896 AJ312897 AJ312898 AJ312899
RefSeq transcript (Entrez)NM_001024647 NM_001278402 NM_022456 NM_175623 NM_175624 NM_175625 NM_175626 NM_175627
Consensus coding sequences : CCDS (NCBI)RAB3IP
Gene ExpressionRAB3IP [ NCBI-GEO ]   RAB3IP [ EBI - ARRAY_EXPRESS ]   RAB3IP [ SEEK ]   RAB3IP [ MEM ]
Gene Expression Viewer (FireBrowse)RAB3IP [ Firebrowse - Broad ]
GenevisibleExpression of RAB3IP in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)117177
GTEX Portal (Tissue expression)RAB3IP
Human Protein AtlasENSG00000127328-RAB3IP [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RAB3IP
Human Protein Atlas [tissue]ENSG00000127328-RAB3IP [tissue]
HPRD10565
Protein Interaction databases
BioGRIDRAB3IP
STRING (EMBL)RAB3IP
ZODIACRAB3IP
Ontologies - Pathways
Litterature
PubMed48 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXRAB3IP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:27:53 CEST 2021

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