Atlas of Genetics and Cytogenetics in Oncology and Haematology


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RAB9BP1 (RAB9B, member RAS oncogene family pseudogene 1)

Identity

Alias_namesRAB9P1
RAB9
Other alias
HGNC (Hugo) RAB9BP1
LocusID (NCBI) 9366
Atlas_Id 51468
Location 5q21.2  [Link to chromosome band 5q21]
Location_base_pair Starts at 105099474 and ends at 105100098 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RAB9BP1   9793
Cards
Entrez_Gene (NCBI)RAB9BP1  9366  RAB9B, member RAS oncogene family pseudogene 1
AliasesRAB9P1
GeneCards (Weizmann)RAB9BP1
Ensembl hg19 (Hinxton)ENSG00000232159 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232159 [Gene_View]  chr5:105099474-105100098 [Contig_View]  RAB9BP1 [Vega]
ICGC DataPortalENSG00000232159
TCGA cBioPortalRAB9BP1
AceView (NCBI)RAB9BP1
Genatlas (Paris)RAB9BP1
WikiGenes9366
SOURCE (Princeton)RAB9BP1
Genetics Home Reference (NIH)RAB9BP1
Genomic and cartography
GoldenPath hg38 (UCSC)RAB9BP1  -     chr5:105099474-105100098 +  5q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RAB9BP1  -     5q21.2   [Description]    (hg19-Feb_2009)
EnsemblRAB9BP1 - 5q21.2 [CytoView hg19]  RAB9BP1 - 5q21.2 [CytoView hg38]
Mapping of homologs : NCBIRAB9BP1 [Mapview hg19]  RAB9BP1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)U44105
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RAB9BP1
Cluster EST : UnigeneHs.158296 [ NCBI ]
CGAP (NCI)Hs.158296
Alternative Splicing GalleryENSG00000232159
Gene ExpressionRAB9BP1 [ NCBI-GEO ]   RAB9BP1 [ EBI - ARRAY_EXPRESS ]   RAB9BP1 [ SEEK ]   RAB9BP1 [ MEM ]
Gene Expression Viewer (FireBrowse)RAB9BP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)9366
GTEX Portal (Tissue expression)RAB9BP1
Human Protein AtlasENSG00000232159-RAB9BP1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RAB9BP1
DMDM Disease mutations9366
Blocks (Seattle)RAB9BP1
Human Protein Atlas [tissue]ENSG00000232159-RAB9BP1 [tissue]
Protein Interaction databases
FunCoupENSG00000232159
BioGRIDRAB9BP1
STRING (EMBL)RAB9BP1
ZODIACRAB9BP1
Ontologies - Pathways
Huge Navigator RAB9BP1 [HugePedia]
snp3D : Map Gene to Disease9366
BioCentury BCIQRAB9BP1
ClinGenRAB9BP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9366
Chemical/Pharm GKB GenePA34154
Clinical trialRAB9BP1
Miscellaneous
canSAR (ICR)RAB9BP1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRAB9BP1
EVEXRAB9BP1
GoPubMedRAB9BP1
iHOPRAB9BP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:31:29 CET 2017

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