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RABAC1 (Rab acceptor 1)

Identity

Alias_namesRab acceptor 1 (prenylated)
Alias_symbol (synonym)PRA1
PRAF1
YIP3
Other alias
HGNC (Hugo) RABAC1
LocusID (NCBI) 10567
Atlas_Id 46483
Location 19q13.2  [Link to chromosome band 19q13]
Location_base_pair Starts at 41956681 and ends at 41959376 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RABAC1   9794
Cards
Entrez_Gene (NCBI)RABAC1  10567  Rab acceptor 1
AliasesPRA1; PRAF1; YIP3
GeneCards (Weizmann)RABAC1
Ensembl hg19 (Hinxton)ENSG00000105404 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000105404 [Gene_View]  chr19:41956681-41959376 [Contig_View]  RABAC1 [Vega]
ICGC DataPortalENSG00000105404
TCGA cBioPortalRABAC1
AceView (NCBI)RABAC1
Genatlas (Paris)RABAC1
WikiGenes10567
SOURCE (Princeton)RABAC1
Genetics Home Reference (NIH)RABAC1
Genomic and cartography
GoldenPath hg38 (UCSC)RABAC1  -     chr19:41956681-41959376 -  19q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RABAC1  -     19q13.2   [Description]    (hg19-Feb_2009)
EnsemblRABAC1 - 19q13.2 [CytoView hg19]  RABAC1 - 19q13.2 [CytoView hg38]
Mapping of homologs : NCBIRABAC1 [Mapview hg19]  RABAC1 [Mapview hg38]
OMIM604925   
Gene and transcription
Genbank (Entrez)AF112202 AF112996 AI376198 AJ133534 BC008950
RefSeq transcript (Entrez)NM_006423
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RABAC1
Cluster EST : UnigeneHs.11417 [ NCBI ]
CGAP (NCI)Hs.11417
Alternative Splicing GalleryENSG00000105404
Gene ExpressionRABAC1 [ NCBI-GEO ]   RABAC1 [ EBI - ARRAY_EXPRESS ]   RABAC1 [ SEEK ]   RABAC1 [ MEM ]
Gene Expression Viewer (FireBrowse)RABAC1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10567
GTEX Portal (Tissue expression)RABAC1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UI14   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UI14  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UI14
Splice isoforms : SwissVarQ9UI14
PhosPhoSitePlusQ9UI14
Domains : Interpro (EBI)Prenylated_rab_accept_PRA1   
Domain families : Pfam (Sanger)PRA1 (PF03208)   
Domain families : Pfam (NCBI)pfam03208   
Conserved Domain (NCBI)RABAC1
DMDM Disease mutations10567
Blocks (Seattle)RABAC1
SuperfamilyQ9UI14
Human Protein AtlasENSG00000105404
Peptide AtlasQ9UI14
HPRD05375
IPIIPI00007909   
Protein Interaction databases
DIP (DOE-UCLA)Q9UI14
IntAct (EBI)Q9UI14
FunCoupENSG00000105404
BioGRIDRABAC1
STRING (EMBL)RABAC1
ZODIACRABAC1
Ontologies - Pathways
QuickGOQ9UI14
Ontology : AmiGOprotein binding  Golgi apparatus  plasma membrane  synaptic vesicle  protein C-terminus binding  membrane  integral component of membrane  cell junction  identical protein binding  proline-rich region binding  
Ontology : EGO-EBIprotein binding  Golgi apparatus  plasma membrane  synaptic vesicle  protein C-terminus binding  membrane  integral component of membrane  cell junction  identical protein binding  proline-rich region binding  
NDEx NetworkRABAC1
Atlas of Cancer Signalling NetworkRABAC1
Wikipedia pathwaysRABAC1
Orthology - Evolution
OrthoDB10567
GeneTree (enSembl)ENSG00000105404
Phylogenetic Trees/Animal Genes : TreeFamRABAC1
HOVERGENQ9UI14
HOGENOMQ9UI14
Homologs : HomoloGeneRABAC1
Homology/Alignments : Family Browser (UCSC)RABAC1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRABAC1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RABAC1
dbVarRABAC1
ClinVarRABAC1
1000_GenomesRABAC1 
Exome Variant ServerRABAC1
ExAC (Exome Aggregation Consortium)RABAC1 (select the gene name)
Genetic variants : HAPMAP10567
Genomic Variants (DGV)RABAC1 [DGVbeta]
DECIPHERRABAC1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRABAC1 
Mutations
ICGC Data PortalRABAC1 
TCGA Data PortalRABAC1 
Broad Tumor PortalRABAC1
OASIS PortalRABAC1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRABAC1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRABAC1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RABAC1
DgiDB (Drug Gene Interaction Database)RABAC1
DoCM (Curated mutations)RABAC1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RABAC1 (select a term)
intoGenRABAC1
Cancer3DRABAC1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604925   
Orphanet
MedgenRABAC1
Genetic Testing Registry RABAC1
NextProtQ9UI14 [Medical]
TSGene10567
GENETestsRABAC1
Target ValidationRABAC1
Huge Navigator RABAC1 [HugePedia]
snp3D : Map Gene to Disease10567
BioCentury BCIQRABAC1
ClinGenRABAC1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10567
Chemical/Pharm GKB GenePA34155
Clinical trialRABAC1
Miscellaneous
canSAR (ICR)RABAC1 (select the gene name)
Probes
Litterature
PubMed35 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRABAC1
EVEXRABAC1
GoPubMedRABAC1
iHOPRABAC1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:27:48 CEST 2017

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