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RABGAP1L (RAB GTPase activating protein 1 like)

Identity

Alias (NCBI)HHL
TBC1D18
HGNC (Hugo) RABGAP1L
HGNC Alias symbHHL
TBC1D18
KIAA0471
FLJ38519
LocusID (NCBI) 9910
Atlas_Id 46970
Location 1q25.1  [Link to chromosome band 1q25]
Location_base_pair Starts at 174159414 and ends at 174958190 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
AFF1 (4q21.3) / RABGAP1L (1q25.1)CACYBP (1q25.1) / RABGAP1L (1q25.1)CNKSR3 (6q25.2) / RABGAP1L (1q25.1)
KDM5B (1q32.1) / RABGAP1L (1q25.1)RABGAP1L (1q25.1) / ACBD6 (1q25.2)RABGAP1L (1q25.1) / ALB (4q13.3)
RABGAP1L (1q25.1) / CACYBP (1q25.1)RABGAP1L (1q25.1) / CD68 (17p13.1)RABGAP1L (1q25.1) / CLIP1 (12q24.31)
RABGAP1L (1q25.1) / KLHL20 (1q25.1)RABGAP1L (1q25.1) / KMT2A (11q23.3)RABGAP1L (1q25.1) / LGR6 (1q32.1)
RABGAP1L (1q25.1) / OSER1 (20q13.12)RABGAP1L (1q25.1) / RNF212 (4p16.3)RABGAP1L (1q25.1) / TUBB1 (20q13.32)
RABGAP1L (1q25.1) / ZBTB37 (1q25.1)SERP1 (3q25.1) / RABGAP1L (1q25.1)SLC38A11 (2q24.3) / RABGAP1L (1q25.1)
SPAG17 (1p12) / RABGAP1L (1q25.1)SQSTM1 (5q35.3) / RABGAP1L (1q25.1)UBE2E1 (3p24.3) / RABGAP1L (1q25.1)
KDM5B 1q32.1 / RABGAP1L 1q25.1RABGAP1L 1q25.1 / ACBD6 1q25.2RABGAP1L 1q25.1 / LGR6 1q32.1
SLC38A11 2q24.3 / RABGAP1L 1q25.1SPAG17 1p12 / RABGAP1L 1q25.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 3 ]
  del(1)(q25q25) RABGAP1L/ZBTB37
t(1;20)(q25;q13) RABGAP1L/TUBB1
AFF1/RABGAP1L ()


External links

Nomenclature
HGNC (Hugo)RABGAP1L   24663
Cards
Entrez_Gene (NCBI)RABGAP1L    RAB GTPase activating protein 1 like
AliasesHHL; TBC1D18
GeneCards (Weizmann)RABGAP1L
Ensembl hg19 (Hinxton)ENSG00000152061 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000152061 [Gene_View]  ENSG00000152061 [Sequence]  chr1:174159414-174958190 [Contig_View]  RABGAP1L [Vega]
ICGC DataPortalENSG00000152061
TCGA cBioPortalRABGAP1L
AceView (NCBI)RABGAP1L
Genatlas (Paris)RABGAP1L
SOURCE (Princeton)RABGAP1L
Genetics Home Reference (NIH)RABGAP1L
Genomic and cartography
GoldenPath hg38 (UCSC)RABGAP1L  -     chr1:174159414-174958190 +  1q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RABGAP1L  -     1q25.1   [Description]    (hg19-Feb_2009)
GoldenPathRABGAP1L - 1q25.1 [CytoView hg19]  RABGAP1L - 1q25.1 [CytoView hg38]
ImmunoBaseENSG00000152061
Genome Data Viewer NCBIRABGAP1L [Mapview hg19]  
OMIM609238   
Gene and transcription
Genbank (Entrez)AA836500 AB007940 AB019490 AB019491 AB019492
RefSeq transcript (Entrez)NM_001035230 NM_001243763 NM_001243764 NM_001243765 NM_001330989 NM_001366445 NM_001366446 NM_001366447 NM_001366448 NM_001366449 NM_001366450 NM_001366451 NM_001366452 NM_001366453 NM_001366454 NM_001366455 NM_001366456 NM_001366457 NM_014857
Consensus coding sequences : CCDS (NCBI)RABGAP1L
Gene ExpressionRABGAP1L [ NCBI-GEO ]   RABGAP1L [ EBI - ARRAY_EXPRESS ]   RABGAP1L [ SEEK ]   RABGAP1L [ MEM ]
Gene Expression Viewer (FireBrowse)RABGAP1L [ Firebrowse - Broad ]
GenevisibleExpression of RABGAP1L in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9910
GTEX Portal (Tissue expression)RABGAP1L
Human Protein AtlasENSG00000152061-RABGAP1L [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RABGAP1L
Human Protein Atlas [tissue]ENSG00000152061-RABGAP1L [tissue]
HPRD16464
Protein Interaction databases
BioGRIDRABGAP1L
STRING (EMBL)RABGAP1L
ZODIACRABGAP1L
Ontologies - Pathways
Litterature
PubMed31 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXRABGAP1L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:28:01 CEST 2021

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