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RABL2A (RAB, member of RAS oncogene family like 2A)

Identity

Other alias-
HGNC (Hugo) RABL2A
LocusID (NCBI) 11159
Atlas_Id 42015
Location 2q14.1  [Link to chromosome band 2q14]
Location_base_pair Starts at 113627229 and ends at 113643398 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RABL2A   9799
Cards
Entrez_Gene (NCBI)RABL2A  11159  RAB, member of RAS oncogene family like 2A
Aliases
GeneCards (Weizmann)RABL2A
Ensembl hg19 (Hinxton)ENSG00000144134 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000144134 [Gene_View]  chr2:113627229-113643398 [Contig_View]  RABL2A [Vega]
ICGC DataPortalENSG00000144134
TCGA cBioPortalRABL2A
AceView (NCBI)RABL2A
Genatlas (Paris)RABL2A
WikiGenes11159
SOURCE (Princeton)RABL2A
Genetics Home Reference (NIH)RABL2A
Genomic and cartography
GoldenPath hg38 (UCSC)RABL2A  -     chr2:113627229-113643398 +  2q14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RABL2A  -     2q14.1   [Description]    (hg19-Feb_2009)
EnsemblRABL2A - 2q14.1 [CytoView hg19]  RABL2A - 2q14.1 [CytoView hg38]
Mapping of homologs : NCBIRABL2A [Mapview hg19]  RABL2A [Mapview hg38]
OMIM605412   
Gene and transcription
Genbank (Entrez)AF095350 AF095351 AK092971 AK289496 AL137649
RefSeq transcript (Entrez)NM_001306158 NM_001306159 NM_001306160 NM_001306161 NM_007082 NM_013412
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RABL2A
Cluster EST : UnigeneHs.446425 [ NCBI ]
CGAP (NCI)Hs.446425
Alternative Splicing GalleryENSG00000144134
Gene ExpressionRABL2A [ NCBI-GEO ]   RABL2A [ EBI - ARRAY_EXPRESS ]   RABL2A [ SEEK ]   RABL2A [ MEM ]
Gene Expression Viewer (FireBrowse)RABL2A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)11159
GTEX Portal (Tissue expression)RABL2A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UBK7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UBK7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UBK7
Splice isoforms : SwissVarQ9UBK7
PhosPhoSitePlusQ9UBK7
Domaine pattern : Prosite (Expaxy)RAB (PS51419)   
Domains : Interpro (EBI)P-loop_NTPase    Small_GTP-bd_dom    Small_GTPase   
Domain families : Pfam (Sanger)Ras (PF00071)   
Domain families : Pfam (NCBI)pfam00071   
Conserved Domain (NCBI)RABL2A
DMDM Disease mutations11159
Blocks (Seattle)RABL2A
SuperfamilyQ9UBK7
Human Protein AtlasENSG00000144134
Peptide AtlasQ9UBK7
HPRD10394
IPIIPI00924726   
Protein Interaction databases
DIP (DOE-UCLA)Q9UBK7
IntAct (EBI)Q9UBK7
FunCoupENSG00000144134
BioGRIDRABL2A
STRING (EMBL)RABL2A
ZODIACRABL2A
Ontologies - Pathways
QuickGOQ9UBK7
Ontology : AmiGOGTPase activity  GTP binding  
Ontology : EGO-EBIGTPase activity  GTP binding  
NDEx NetworkRABL2A
Atlas of Cancer Signalling NetworkRABL2A
Wikipedia pathwaysRABL2A
Orthology - Evolution
OrthoDB11159
GeneTree (enSembl)ENSG00000144134
Phylogenetic Trees/Animal Genes : TreeFamRABL2A
HOVERGENQ9UBK7
HOGENOMQ9UBK7
Homologs : HomoloGeneRABL2A
Homology/Alignments : Family Browser (UCSC)RABL2A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRABL2A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RABL2A
dbVarRABL2A
ClinVarRABL2A
1000_GenomesRABL2A 
Exome Variant ServerRABL2A
ExAC (Exome Aggregation Consortium)RABL2A (select the gene name)
Genetic variants : HAPMAP11159
Genomic Variants (DGV)RABL2A [DGVbeta]
DECIPHERRABL2A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRABL2A 
Mutations
ICGC Data PortalRABL2A 
TCGA Data PortalRABL2A 
Broad Tumor PortalRABL2A
OASIS PortalRABL2A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRABL2A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRABL2A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RABL2A
DgiDB (Drug Gene Interaction Database)RABL2A
DoCM (Curated mutations)RABL2A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RABL2A (select a term)
intoGenRABL2A
Cancer3DRABL2A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605412   
Orphanet
MedgenRABL2A
Genetic Testing Registry RABL2A
NextProtQ9UBK7 [Medical]
TSGene11159
GENETestsRABL2A
Target ValidationRABL2A
Huge Navigator RABL2A [HugePedia]
snp3D : Map Gene to Disease11159
BioCentury BCIQRABL2A
ClinGenRABL2A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD11159
Chemical/Pharm GKB GenePA34159
Clinical trialRABL2A
Miscellaneous
canSAR (ICR)RABL2A (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRABL2A
EVEXRABL2A
GoPubMedRABL2A
iHOPRABL2A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:52:19 CEST 2017

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