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RABL5 (RAB, member RAS oncogene family-like 5)

Identity

Other names-
HGNC (Hugo) RABL5
LocusID (NCBI) 64792
Location 7q22.1
Location_base_pair Starts at 100956648 and ends at 100965093 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)RABL5   21895
Cards
Entrez_Gene (NCBI)RABL5  64792  RAB, member RAS oncogene family-like 5
GeneCards (Weizmann)RABL5
Ensembl (Hinxton) [Gene_View]  chr7:100956648-100965093 [Contig_View]  RABL5 [Vega]
cBioPortalRABL5
AceView (NCBI)RABL5
Genatlas (Paris)RABL5
WikiGenes64792
SOURCE (Princeton)NM_001130820 NM_001130821 NM_001130822 NM_022777
Genomic and cartography
GoldenPath (UCSC)RABL5  -  7q22.1   chr7:100956648-100965093 -  7q22.1   [Description]    (hg19-Feb_2009)
EnsemblRABL5 - 7q22.1 [CytoView]
Mapping of homologs : NCBIRABL5 [Mapview]
Gene and transcription
Genbank (Entrez)AK023287 AK024179 AK292254 AK298888 AL157469
RefSeq transcript (Entrez)NM_001130820 NM_001130821 NM_001130822 NM_022777
RefSeq genomic (Entrez)AC_000068 AC_000139 NC_000007 NC_018918 NT_007933 NT_079596 NW_001839067 NW_004929332
Consensus coding sequences : CCDS (NCBI)RABL5
Cluster EST : UnigeneHs.389104 [ NCBI ]
CGAP (NCI)Hs.389104
Alternative Splicing : Fast-db (Paris)GSHG0028433
Gene ExpressionRABL5 [ NCBI-GEO ]     RABL5 [ SEEK ]   RABL5 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H7X7 (Uniprot)
NextProtQ9H7X7  [Medical]
With graphics : InterProQ9H7X7
Splice isoforms : SwissVarQ9H7X7 (Swissvar)
Domains : Interpro (EBI)P-loop_NTPase [organisation]   Small_GTPase [organisation]  
Related proteins : CluSTrQ9H7X7
Domain families : Pfam (Sanger)Ras (PF00071)   
Domain families : Pfam (NCBI)pfam00071   
DMDM Disease mutations64792
Blocks (Seattle)Q9H7X7
Peptide AtlasQ9H7X7
HPRD15204
IPIIPI00009700   IPI00011360   IPI00922845   IPI00925921   IPI00909609   
Protein Interaction databases
DIP (DOE-UCLA)Q9H7X7
IntAct (EBI)Q9H7X7
BioGRIDRABL5
InParanoidQ9H7X7
Interologous Interaction database Q9H7X7
IntegromeDBRABL5
STRING (EMBL)RABL5
Ontologies - Pathways
Ontology : AmiGOGTP binding  small GTPase mediated signal transduction  
Ontology : EGO-EBIGTP binding  small GTPase mediated signal transduction  
Protein Interaction DatabaseRABL5
Wikipedia pathwaysRABL5
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)RABL5
snp3D : Map Gene to Disease64792
SNP (GeneSNP Utah)RABL5
SNP : HGBaseRABL5
Genetic variants : HAPMAPRABL5
Exome VariantRABL5
1000_GenomesRABL5 
Mutations and Diseases : HGMDRABL5
Genomic VariantsRABL5  RABL5 [DGVbeta]
dbVarRABL5
ClinVarRABL5
Pred. of missensesPolyPhen-2  SIFT(SG)  SIFT(JCVI)  Align-GVGD  MutAssessor  Mutanalyser  
Pred. splicesGeneSplicer  Human Splicing Finder  MaxEntScan  
Diseases
OMIM
MedgenRABL5
GENETestsRABL5
Disease Genetic AssociationRABL5
Huge Navigator RABL5 [HugePedia]  RABL5 [HugeCancerGEM]
General knowledge
Homologs : HomoloGeneRABL5
Homology/Alignments : Family Browser (UCSC)RABL5
Phylogenetic Trees/Animal Genes : TreeFamRABL5
Chemical/Protein Interactions : CTD64792
Chemical/Pharm GKB GenePA134871769
Clinical trialRABL5
Other databases
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
CoreMineRABL5
iHOPRABL5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jul 11 17:15:50 CEST 2014

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