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RAD51AP2 (RAD51 associated protein 2)

Identity

Alias_symbol (synonym)FLJ17540
Other alias-
HGNC (Hugo) RAD51AP2
LocusID (NCBI) 729475
Atlas_Id 72466
Location 2p24.2  [Link to chromosome band 2p24]
Location_base_pair Starts at 17510719 and ends at 17518439 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RAD51AP2   34417
Cards
Entrez_Gene (NCBI)RAD51AP2  729475  RAD51 associated protein 2
Aliases
GeneCards (Weizmann)RAD51AP2
Ensembl hg19 (Hinxton)ENSG00000214842 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000214842 [Gene_View]  chr2:17510719-17518439 [Contig_View]  RAD51AP2 [Vega]
ICGC DataPortalENSG00000214842
TCGA cBioPortalRAD51AP2
AceView (NCBI)RAD51AP2
Genatlas (Paris)RAD51AP2
WikiGenes729475
SOURCE (Princeton)RAD51AP2
Genetics Home Reference (NIH)RAD51AP2
Genomic and cartography
GoldenPath hg38 (UCSC)RAD51AP2  -     chr2:17510719-17518439 -  2p24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RAD51AP2  -     2p24.2   [Description]    (hg19-Feb_2009)
EnsemblRAD51AP2 - 2p24.2 [CytoView hg19]  RAD51AP2 - 2p24.2 [CytoView hg38]
Mapping of homologs : NCBIRAD51AP2 [Mapview hg19]  RAD51AP2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK310498 BG216055 DB514225 DQ860102
RefSeq transcript (Entrez)NM_001099218 NM_001321233
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RAD51AP2
Cluster EST : UnigeneHs.722353 [ NCBI ]
CGAP (NCI)Hs.722353
Alternative Splicing GalleryENSG00000214842
Gene ExpressionRAD51AP2 [ NCBI-GEO ]   RAD51AP2 [ EBI - ARRAY_EXPRESS ]   RAD51AP2 [ SEEK ]   RAD51AP2 [ MEM ]
Gene Expression Viewer (FireBrowse)RAD51AP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)729475
GTEX Portal (Tissue expression)RAD51AP2
Human Protein AtlasENSG00000214842-RAD51AP2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ09MP3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ09MP3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ09MP3
Splice isoforms : SwissVarQ09MP3
PhosPhoSitePlusQ09MP3
Domains : Interpro (EBI)RAD51_interact   
Domain families : Pfam (Sanger)RAD51_interact (PF15696)   
Domain families : Pfam (NCBI)pfam15696   
Conserved Domain (NCBI)RAD51AP2
DMDM Disease mutations729475
Blocks (Seattle)RAD51AP2
SuperfamilyQ09MP3
Human Protein Atlas [tissue]ENSG00000214842-RAD51AP2 [tissue]
Peptide AtlasQ09MP3
IPIIPI00792427   
Protein Interaction databases
DIP (DOE-UCLA)Q09MP3
IntAct (EBI)Q09MP3
FunCoupENSG00000214842
BioGRIDRAD51AP2
STRING (EMBL)RAD51AP2
ZODIACRAD51AP2
Ontologies - Pathways
QuickGOQ09MP3
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkRAD51AP2
Atlas of Cancer Signalling NetworkRAD51AP2
Wikipedia pathwaysRAD51AP2
Orthology - Evolution
OrthoDB729475
GeneTree (enSembl)ENSG00000214842
Phylogenetic Trees/Animal Genes : TreeFamRAD51AP2
HOVERGENQ09MP3
HOGENOMQ09MP3
Homologs : HomoloGeneRAD51AP2
Homology/Alignments : Family Browser (UCSC)RAD51AP2
Gene fusions - Rearrangements
Fusion: Tumor Portal RAD51AP2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRAD51AP2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RAD51AP2
dbVarRAD51AP2
ClinVarRAD51AP2
1000_GenomesRAD51AP2 
Exome Variant ServerRAD51AP2
ExAC (Exome Aggregation Consortium)ENSG00000214842
GNOMAD BrowserENSG00000214842
Genetic variants : HAPMAP729475
Genomic Variants (DGV)RAD51AP2 [DGVbeta]
DECIPHERRAD51AP2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRAD51AP2 
Mutations
ICGC Data PortalRAD51AP2 
TCGA Data PortalRAD51AP2 
Broad Tumor PortalRAD51AP2
OASIS PortalRAD51AP2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRAD51AP2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRAD51AP2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RAD51AP2
DgiDB (Drug Gene Interaction Database)RAD51AP2
DoCM (Curated mutations)RAD51AP2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RAD51AP2 (select a term)
intoGenRAD51AP2
Cancer3DRAD51AP2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenRAD51AP2
Genetic Testing Registry RAD51AP2
NextProtQ09MP3 [Medical]
TSGene729475
GENETestsRAD51AP2
Target ValidationRAD51AP2
Huge Navigator RAD51AP2 [HugePedia]
snp3D : Map Gene to Disease729475
BioCentury BCIQRAD51AP2
ClinGenRAD51AP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD729475
Chemical/Pharm GKB GenePA164725260
Clinical trialRAD51AP2
Miscellaneous
canSAR (ICR)RAD51AP2 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRAD51AP2
EVEXRAD51AP2
GoPubMedRAD51AP2
iHOPRAD51AP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:24:20 CET 2017

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