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RADIL (Rap associating with DIL domain)

Identity

Alias_namesRas association and DIL domains
Alias_symbol (synonym)FLJ10324
KIAA1849
RASIP2
Other alias
HGNC (Hugo) RADIL
LocusID (NCBI) 55698
Atlas_Id 53199
Location 7p22.1  [Link to chromosome band 7p22]
Location_base_pair Starts at 4838740 and ends at 4923335 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CFI (4q25) / RADIL (7p22.1)RADIL (7p22.1) / SPATA3 (2q37.1)RADIL (7p22.1) / STXBP2 (19p13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RADIL   22226
Cards
Entrez_Gene (NCBI)RADIL  55698  Rap associating with DIL domain
AliasesRASIP2
GeneCards (Weizmann)RADIL
Ensembl hg19 (Hinxton)ENSG00000157927 [Gene_View]  chr7:4838740-4923335 [Contig_View]  RADIL [Vega]
Ensembl hg38 (Hinxton)ENSG00000157927 [Gene_View]  chr7:4838740-4923335 [Contig_View]  RADIL [Vega]
ICGC DataPortalENSG00000157927
TCGA cBioPortalRADIL
AceView (NCBI)RADIL
Genatlas (Paris)RADIL
WikiGenes55698
SOURCE (Princeton)RADIL
Genetics Home Reference (NIH)RADIL
Genomic and cartography
GoldenPath hg19 (UCSC)RADIL  -     chr7:4838740-4923335 -  7p22.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)RADIL  -     7p22.1   [Description]    (hg38-Dec_2013)
EnsemblRADIL - 7p22.1 [CytoView hg19]  RADIL - 7p22.1 [CytoView hg38]
Mapping of homologs : NCBIRADIL [Mapview hg19]  RADIL [Mapview hg38]
OMIM611491   
Gene and transcription
Genbank (Entrez)AB058752 AK000997 AK001186 AK294745 AK296325
RefSeq transcript (Entrez)NM_018059
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007819 NW_004929329
Consensus coding sequences : CCDS (NCBI)RADIL
Cluster EST : UnigeneHs.667336 [ NCBI ]
CGAP (NCI)Hs.667336
Alternative Splicing GalleryENSG00000157927
Gene ExpressionRADIL [ NCBI-GEO ]   RADIL [ EBI - ARRAY_EXPRESS ]   RADIL [ SEEK ]   RADIL [ MEM ]
Gene Expression Viewer (FireBrowse)RADIL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55698
GTEX Portal (Tissue expression)RADIL
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96JH8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96JH8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96JH8
Splice isoforms : SwissVarQ96JH8
PhosPhoSitePlusQ96JH8
Domaine pattern : Prosite (Expaxy)DILUTE (PS51126)    PDZ (PS50106)    RA (PS50200)   
Domains : Interpro (EBI)Dilute_dom    FHA_dom    PDZ    RA_dom    SMAD_FHA_domain    Ubiquitin-rel_dom   
Domain families : Pfam (Sanger)DIL (PF01843)    PDZ (PF00595)    RA (PF00788)   
Domain families : Pfam (NCBI)pfam01843    pfam00595    pfam00788   
Domain families : Smart (EMBL)PDZ (SM00228)  RA (SM00314)  
Conserved Domain (NCBI)RADIL
DMDM Disease mutations55698
Blocks (Seattle)RADIL
PDB (SRS)1UM1    3EC8   
PDB (PDBSum)1UM1    3EC8   
PDB (IMB)1UM1    3EC8   
PDB (RSDB)1UM1    3EC8   
Structural Biology KnowledgeBase1UM1    3EC8   
SCOP (Structural Classification of Proteins)1UM1    3EC8   
CATH (Classification of proteins structures)1UM1    3EC8   
SuperfamilyQ96JH8
Human Protein AtlasENSG00000157927
Peptide AtlasQ96JH8
HPRD07663
IPIIPI00746097   IPI01012458   IPI00903081   IPI01008965   IPI00874240   IPI01011243   IPI00437989   IPI00893940   
Protein Interaction databases
DIP (DOE-UCLA)Q96JH8
IntAct (EBI)Q96JH8
FunCoupENSG00000157927
BioGRIDRADIL
STRING (EMBL)RADIL
ZODIACRADIL
Ontologies - Pathways
QuickGOQ96JH8
Ontology : AmiGOprotein binding  microtubule  signal transduction  multicellular organism development  substrate adhesion-dependent cell spreading  
Ontology : EGO-EBIprotein binding  microtubule  signal transduction  multicellular organism development  substrate adhesion-dependent cell spreading  
NDEx NetworkRADIL
Atlas of Cancer Signalling NetworkRADIL
Wikipedia pathwaysRADIL
Orthology - Evolution
OrthoDB55698
GeneTree (enSembl)ENSG00000157927
Phylogenetic Trees/Animal Genes : TreeFamRADIL
HOVERGENQ96JH8
HOGENOMQ96JH8
Homologs : HomoloGeneRADIL
Homology/Alignments : Family Browser (UCSC)RADIL
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRADIL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RADIL
dbVarRADIL
ClinVarRADIL
1000_GenomesRADIL 
Exome Variant ServerRADIL
ExAC (Exome Aggregation Consortium)RADIL (select the gene name)
Genetic variants : HAPMAP55698
Genomic Variants (DGV)RADIL [DGVbeta]
DECIPHER (Syndromes)7:4838740-4923335  ENSG00000157927
CONAN: Copy Number AnalysisRADIL 
Mutations
ICGC Data PortalRADIL 
TCGA Data PortalRADIL 
Broad Tumor PortalRADIL
OASIS PortalRADIL [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRADIL  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRADIL
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RADIL
DgiDB (Drug Gene Interaction Database)RADIL
DoCM (Curated mutations)RADIL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RADIL (select a term)
intoGenRADIL
Cancer3DRADIL(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611491   
Orphanet
MedgenRADIL
Genetic Testing Registry RADIL
NextProtQ96JH8 [Medical]
TSGene55698
GENETestsRADIL
Huge Navigator RADIL [HugePedia]
snp3D : Map Gene to Disease55698
BioCentury BCIQRADIL
ClinGenRADIL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55698
Chemical/Pharm GKB GenePA164725261
Clinical trialRADIL
Miscellaneous
canSAR (ICR)RADIL (select the gene name)
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRADIL
EVEXRADIL
GoPubMedRADIL
iHOPRADIL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:24:14 CET 2017

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