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RAET1E-AS1 (RAET1E antisense RNA 1)

Identity

Alias_symbol (synonym)RAET1G-AS1
Other alias
HGNC (Hugo) RAET1E-AS1
LocusID (NCBI) 100652739
Atlas_Id 72469
Location 6q25.1  [Link to chromosome band 6q25]
Location_base_pair Starts at 149863498 and ends at 149919508 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RAET1E-AS1   48994
Cards
Entrez_Gene (NCBI)RAET1E-AS1  100652739  RAET1E antisense RNA 1
AliasesRAET1G-AS1
GeneCards (Weizmann)RAET1E-AS1
Ensembl hg19 (Hinxton)ENSG00000223701 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000223701 [Gene_View]  ENSG00000223701 [Sequence]  chr6:149863498-149919508 [Contig_View]  RAET1E-AS1 [Vega]
ICGC DataPortalENSG00000223701
TCGA cBioPortalRAET1E-AS1
AceView (NCBI)RAET1E-AS1
Genatlas (Paris)RAET1E-AS1
WikiGenes100652739
SOURCE (Princeton)RAET1E-AS1
Genetics Home Reference (NIH)RAET1E-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)RAET1E-AS1  -     chr6:149863498-149919508 +  6q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RAET1E-AS1  -     6q25.1   [Description]    (hg19-Feb_2009)
EnsemblRAET1E-AS1 - 6q25.1 [CytoView hg19]  RAET1E-AS1 - 6q25.1 [CytoView hg38]
Mapping of homologs : NCBIRAET1E-AS1 [Mapview hg19]  RAET1E-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW241754 BC016788 DB521065 FY211027
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RAET1E-AS1
Cluster EST : UnigeneHs.642734 [ NCBI ]
CGAP (NCI)Hs.642734
Alternative Splicing GalleryENSG00000223701
Gene ExpressionRAET1E-AS1 [ NCBI-GEO ]   RAET1E-AS1 [ EBI - ARRAY_EXPRESS ]   RAET1E-AS1 [ SEEK ]   RAET1E-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)RAET1E-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100652739
GTEX Portal (Tissue expression)RAET1E-AS1
Human Protein AtlasENSG00000223701-RAET1E-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RAET1E-AS1
DMDM Disease mutations100652739
Blocks (Seattle)RAET1E-AS1
Human Protein Atlas [tissue]ENSG00000223701-RAET1E-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000223701
BioGRIDRAET1E-AS1
STRING (EMBL)RAET1E-AS1
ZODIACRAET1E-AS1
Ontologies - Pathways
Huge Navigator RAET1E-AS1 [HugePedia]
snp3D : Map Gene to Disease100652739
BioCentury BCIQRAET1E-AS1
ClinGenRAET1E-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100652739
Clinical trialRAET1E-AS1
Miscellaneous
canSAR (ICR)RAET1E-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRAET1E-AS1
EVEXRAET1E-AS1
GoPubMedRAET1E-AS1
iHOPRAET1E-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:25:55 CEST 2018

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