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RAMAC (RNA guanine-7 methyltransferase activating subunit)

Identity

Other aliasC15orf18
FAM103A1
HsT19360
RAM
RAMMET
HGNC (Hugo) RAMAC
LocusID (NCBI) 83640
Atlas_Id 80549
Location 15q25.2  [Link to chromosome band 15q25]
Location_base_pair Starts at 82986203 and ends at 82991057 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)RAMAC   31022
Cards
Entrez_Gene (NCBI)RAMAC  83640  RNA guanine-7 methyltransferase activating subunit
AliasesC15orf18; FAM103A1; HsT19360; RAM; 
RAMMET
GeneCards (Weizmann)RAMAC
Ensembl hg19 (Hinxton)ENSG00000169612 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000169612 [Gene_View]  ENSG00000169612 [Sequence]  chr15:82986203-82991057 [Contig_View]  RAMAC [Vega]
ICGC DataPortalENSG00000169612
TCGA cBioPortalRAMAC
AceView (NCBI)RAMAC
Genatlas (Paris)RAMAC
WikiGenes83640
SOURCE (Princeton)RAMAC
Genetics Home Reference (NIH)RAMAC
Genomic and cartography
GoldenPath hg38 (UCSC)RAMAC  -     chr15:82986203-82991057 +  15q25.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RAMAC  -     15q25.2   [Description]    (hg19-Feb_2009)
GoldenPathRAMAC - 15q25.2 [CytoView hg19]  RAMAC - 15q25.2 [CytoView hg38]
ImmunoBaseENSG00000169612
Mapping of homologs : NCBIRAMAC [Mapview hg19]  RAMAC [Mapview hg38]
OMIM614547   
Gene and transcription
Genbank (Entrez)AK027095 AL049237 BC003627 BC027181 BC112329
RefSeq transcript (Entrez)NM_031452
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RAMAC
Cluster EST : UnigeneHs.80624 [ NCBI ]
CGAP (NCI)Hs.80624
Alternative Splicing GalleryENSG00000169612
Gene ExpressionRAMAC [ NCBI-GEO ]   RAMAC [ EBI - ARRAY_EXPRESS ]   RAMAC [ SEEK ]   RAMAC [ MEM ]
Gene Expression Viewer (FireBrowse)RAMAC [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)83640
GTEX Portal (Tissue expression)RAMAC
Human Protein AtlasENSG00000169612-RAMAC [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BTL3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BTL3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BTL3
Splice isoforms : SwissVarQ9BTL3
PhosPhoSitePlusQ9BTL3
Domains : Interpro (EBI)RAM   
Domain families : Pfam (Sanger)RAM (PF15320)   
Domain families : Pfam (NCBI)pfam15320   
Conserved Domain (NCBI)RAMAC
DMDM Disease mutations83640
Blocks (Seattle)RAMAC
PDB (RSDB)5E8J   
PDB Europe5E8J   
PDB (PDBSum)5E8J   
PDB (IMB)5E8J   
Structural Biology KnowledgeBase5E8J   
SCOP (Structural Classification of Proteins)5E8J   
CATH (Classification of proteins structures)5E8J   
SuperfamilyQ9BTL3
Human Protein Atlas [tissue]ENSG00000169612-RAMAC [tissue]
Peptide AtlasQ9BTL3
IPIIPI00027798   
Protein Interaction databases
DIP (DOE-UCLA)Q9BTL3
IntAct (EBI)Q9BTL3
FunCoupENSG00000169612
BioGRIDRAMAC
STRING (EMBL)RAMAC
ZODIACRAMAC
Ontologies - Pathways
QuickGOQ9BTL3
Ontology : AmiGORNA binding  RNA binding  mRNA (guanine-N7-)-methyltransferase activity  protein binding  nucleus  nucleoplasm  mRNA cap binding complex  7-methylguanosine mRNA capping  mRNA cap methyltransferase complex  methylation  recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex  RNA 5'-cap (guanine-N7)-methylation  
Ontology : EGO-EBIRNA binding  RNA binding  mRNA (guanine-N7-)-methyltransferase activity  protein binding  nucleus  nucleoplasm  mRNA cap binding complex  7-methylguanosine mRNA capping  mRNA cap methyltransferase complex  methylation  recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex  RNA 5'-cap (guanine-N7)-methylation  
NDEx NetworkRAMAC
Atlas of Cancer Signalling NetworkRAMAC
Wikipedia pathwaysRAMAC
Orthology - Evolution
OrthoDB83640
GeneTree (enSembl)ENSG00000169612
Phylogenetic Trees/Animal Genes : TreeFamRAMAC
HOGENOMQ9BTL3
Homologs : HomoloGeneRAMAC
Homology/Alignments : Family Browser (UCSC)RAMAC
Gene fusions - Rearrangements
Fusion : QuiverRAMAC
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRAMAC [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RAMAC
dbVarRAMAC
ClinVarRAMAC
1000_GenomesRAMAC 
Exome Variant ServerRAMAC
ExAC (Exome Aggregation Consortium)ENSG00000169612
GNOMAD BrowserENSG00000169612
Varsome BrowserRAMAC
Genetic variants : HAPMAP83640
Genomic Variants (DGV)RAMAC [DGVbeta]
DECIPHERRAMAC [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRAMAC 
Mutations
ICGC Data PortalRAMAC 
TCGA Data PortalRAMAC 
Broad Tumor PortalRAMAC
OASIS PortalRAMAC [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDRAMAC
BioMutasearch RAMAC
DgiDB (Drug Gene Interaction Database)RAMAC
DoCM (Curated mutations)RAMAC (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RAMAC (select a term)
intoGenRAMAC
Cancer3DRAMAC(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614547   
Orphanet
DisGeNETRAMAC
MedgenRAMAC
Genetic Testing Registry RAMAC
NextProtQ9BTL3 [Medical]
TSGene83640
GENETestsRAMAC
Target ValidationRAMAC
Huge Navigator RAMAC [HugePedia]
snp3D : Map Gene to Disease83640
BioCentury BCIQRAMAC
ClinGenRAMAC
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD83640
Chemical/Pharm GKB GenePA142671786
Clinical trialRAMAC
Miscellaneous
canSAR (ICR)RAMAC (select the gene name)
DataMed IndexRAMAC
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRAMAC
EVEXRAMAC
GoPubMedRAMAC
iHOPRAMAC
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 16:02:45 CEST 2019

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