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RANGRF (RAN guanine nucleotide release factor)

Identity

Alias_symbol (synonym)MOG1
HSPC165
HSPC236
RANGNRF
Other alias
HGNC (Hugo) RANGRF
LocusID (NCBI) 29098
Atlas_Id 72485
Location 17p13.1  [Link to chromosome band 17p13]
Location_base_pair Starts at 8288651 and ends at 8290091 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RANGRF   17679
Cards
Entrez_Gene (NCBI)RANGRF  29098  RAN guanine nucleotide release factor
AliasesHSPC165; HSPC236; MOG1; RANGNRF
GeneCards (Weizmann)RANGRF
Ensembl hg19 (Hinxton)ENSG00000108961 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000108961 [Gene_View]  chr17:8288651-8290091 [Contig_View]  RANGRF [Vega]
ICGC DataPortalENSG00000108961
TCGA cBioPortalRANGRF
AceView (NCBI)RANGRF
Genatlas (Paris)RANGRF
WikiGenes29098
SOURCE (Princeton)RANGRF
Genetics Home Reference (NIH)RANGRF
Genomic and cartography
GoldenPath hg38 (UCSC)RANGRF  -     chr17:8288651-8290091 +  17p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RANGRF  -     17p13.1   [Description]    (hg19-Feb_2009)
EnsemblRANGRF - 17p13.1 [CytoView hg19]  RANGRF - 17p13.1 [CytoView hg38]
Mapping of homologs : NCBIRANGRF [Mapview hg19]  RANGRF [Mapview hg38]
OMIM607954   
Gene and transcription
Genbank (Entrez)AA659738 AF151070 AF161514 AF168714 AF265205
RefSeq transcript (Entrez)NM_001177801 NM_001177802 NM_001330127 NM_016492
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RANGRF
Cluster EST : UnigeneHs.408233 [ NCBI ]
CGAP (NCI)Hs.408233
Alternative Splicing GalleryENSG00000108961
Gene ExpressionRANGRF [ NCBI-GEO ]   RANGRF [ EBI - ARRAY_EXPRESS ]   RANGRF [ SEEK ]   RANGRF [ MEM ]
Gene Expression Viewer (FireBrowse)RANGRF [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)29098
GTEX Portal (Tissue expression)RANGRF
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HD47   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9HD47  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9HD47
Splice isoforms : SwissVarQ9HD47
PhosPhoSitePlusQ9HD47
Domains : Interpro (EBI)Mog1    Mog1/PsbP_a/b/a-sand   
Domain families : Pfam (Sanger)Mog1 (PF04603)   
Domain families : Pfam (NCBI)pfam04603   
Conserved Domain (NCBI)RANGRF
DMDM Disease mutations29098
Blocks (Seattle)RANGRF
SuperfamilyQ9HD47
Human Protein AtlasENSG00000108961
Peptide AtlasQ9HD47
HPRD06407
IPIIPI00025081   IPI00789985   IPI00790572   IPI00794484   IPI00023552   
Protein Interaction databases
DIP (DOE-UCLA)Q9HD47
IntAct (EBI)Q9HD47
FunCoupENSG00000108961
BioGRIDRANGRF
STRING (EMBL)RANGRF
ZODIACRANGRF
Ontologies - Pathways
QuickGOQ9HD47
Ontology : AmiGOregulation of heart rate  regulation of membrane depolarization  regulation of membrane depolarization  guanyl-nucleotide exchange factor activity  Ran guanyl-nucleotide exchange factor activity  nucleus  nucleoplasm  nucleoplasm  cytoplasm  rough endoplasmic reticulum  cytosol  plasma membrane  caveola  ER to Golgi vesicle-mediated transport  Ran GTPase binding  Ran GTPase binding  protein transporter activity  intercalated disc  sodium channel regulator activity  sodium channel regulator activity  protein exit from endoplasmic reticulum  regulation of membrane potential  positive regulation of GTPase activity  ion channel binding  positive regulation of establishment of protein localization to plasma membrane  regulation of bundle of His cell action potential  regulation of cardiac muscle cell action potential involved in regulation of contraction  regulation of membrane depolarization during cardiac muscle cell action potential  regulation of membrane depolarization during cardiac muscle cell action potential  regulation of sodium ion transmembrane transport  regulation of sodium ion transmembrane transport  positive regulation of protein localization to cell surface  positive regulation of protein localization to cell surface  regulation of sodium ion transmembrane transporter activity  regulation of sodium ion transmembrane transporter activity  
Ontology : EGO-EBIregulation of heart rate  regulation of membrane depolarization  regulation of membrane depolarization  guanyl-nucleotide exchange factor activity  Ran guanyl-nucleotide exchange factor activity  nucleus  nucleoplasm  nucleoplasm  cytoplasm  rough endoplasmic reticulum  cytosol  plasma membrane  caveola  ER to Golgi vesicle-mediated transport  Ran GTPase binding  Ran GTPase binding  protein transporter activity  intercalated disc  sodium channel regulator activity  sodium channel regulator activity  protein exit from endoplasmic reticulum  regulation of membrane potential  positive regulation of GTPase activity  ion channel binding  positive regulation of establishment of protein localization to plasma membrane  regulation of bundle of His cell action potential  regulation of cardiac muscle cell action potential involved in regulation of contraction  regulation of membrane depolarization during cardiac muscle cell action potential  regulation of membrane depolarization during cardiac muscle cell action potential  regulation of sodium ion transmembrane transport  regulation of sodium ion transmembrane transport  positive regulation of protein localization to cell surface  positive regulation of protein localization to cell surface  regulation of sodium ion transmembrane transporter activity  regulation of sodium ion transmembrane transporter activity  
NDEx NetworkRANGRF
Atlas of Cancer Signalling NetworkRANGRF
Wikipedia pathwaysRANGRF
Orthology - Evolution
OrthoDB29098
GeneTree (enSembl)ENSG00000108961
Phylogenetic Trees/Animal Genes : TreeFamRANGRF
HOVERGENQ9HD47
HOGENOMQ9HD47
Homologs : HomoloGeneRANGRF
Homology/Alignments : Family Browser (UCSC)RANGRF
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRANGRF [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RANGRF
dbVarRANGRF
ClinVarRANGRF
1000_GenomesRANGRF 
Exome Variant ServerRANGRF
ExAC (Exome Aggregation Consortium)RANGRF (select the gene name)
Genetic variants : HAPMAP29098
Genomic Variants (DGV)RANGRF [DGVbeta]
DECIPHERRANGRF [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRANGRF 
Mutations
ICGC Data PortalRANGRF 
TCGA Data PortalRANGRF 
Broad Tumor PortalRANGRF
OASIS PortalRANGRF [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRANGRF  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRANGRF
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RANGRF
DgiDB (Drug Gene Interaction Database)RANGRF
DoCM (Curated mutations)RANGRF (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RANGRF (select a term)
intoGenRANGRF
Cancer3DRANGRF(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607954   
Orphanet
MedgenRANGRF
Genetic Testing Registry RANGRF
NextProtQ9HD47 [Medical]
TSGene29098
GENETestsRANGRF
Target ValidationRANGRF
Huge Navigator RANGRF [HugePedia]
snp3D : Map Gene to Disease29098
BioCentury BCIQRANGRF
ClinGenRANGRF
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD29098
Chemical/Pharm GKB GenePA162400661
Clinical trialRANGRF
Miscellaneous
canSAR (ICR)RANGRF (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRANGRF
EVEXRANGRF
GoPubMedRANGRF
iHOPRANGRF
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:38:11 CEST 2017

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