Atlas of Genetics and Cytogenetics in Oncology and Haematology


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RAP2C-AS1 (RAP2C antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) RAP2C-AS1
LocusID (NCBI) 101928578
Atlas_Id 72487
Location Xq26.2  [Link to chromosome band Xq26]
Location_base_pair Starts at 132218507 and ends at 132432811 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RAP2C-AS1   40957
Cards
Entrez_Gene (NCBI)RAP2C-AS1  101928578  RAP2C antisense RNA 1
Aliases
GeneCards (Weizmann)RAP2C-AS1
Ensembl hg19 (Hinxton)ENSG00000232160 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232160 [Gene_View]  chrX:132218507-132432811 [Contig_View]  RAP2C-AS1 [Vega]
ICGC DataPortalENSG00000232160
TCGA cBioPortalRAP2C-AS1
AceView (NCBI)RAP2C-AS1
Genatlas (Paris)RAP2C-AS1
WikiGenes101928578
SOURCE (Princeton)RAP2C-AS1
Genetics Home Reference (NIH)RAP2C-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)RAP2C-AS1  -     chrX:132218507-132432811 +  Xq26.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RAP2C-AS1  -     Xq26.2   [Description]    (hg19-Feb_2009)
EnsemblRAP2C-AS1 - Xq26.2 [CytoView hg19]  RAP2C-AS1 - Xq26.2 [CytoView hg38]
Mapping of homologs : NCBIRAP2C-AS1 [Mapview hg19]  RAP2C-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK095439 CA867598
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RAP2C-AS1
Cluster EST : UnigeneHs.556853 [ NCBI ]
CGAP (NCI)Hs.556853
Alternative Splicing GalleryENSG00000232160
Gene ExpressionRAP2C-AS1 [ NCBI-GEO ]   RAP2C-AS1 [ EBI - ARRAY_EXPRESS ]   RAP2C-AS1 [ SEEK ]   RAP2C-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)RAP2C-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928578
GTEX Portal (Tissue expression)RAP2C-AS1
Human Protein AtlasENSG00000232160-RAP2C-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RAP2C-AS1
DMDM Disease mutations101928578
Blocks (Seattle)RAP2C-AS1
Human Protein Atlas [tissue]ENSG00000232160-RAP2C-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000232160
BioGRIDRAP2C-AS1
STRING (EMBL)RAP2C-AS1
ZODIACRAP2C-AS1
Ontologies - Pathways
Huge Navigator RAP2C-AS1 [HugePedia]
snp3D : Map Gene to Disease101928578
BioCentury BCIQRAP2C-AS1
ClinGenRAP2C-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928578
Clinical trialRAP2C-AS1
Miscellaneous
canSAR (ICR)RAP2C-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRAP2C-AS1
EVEXRAP2C-AS1
GoPubMedRAP2C-AS1
iHOPRAP2C-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:24:24 CET 2017

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