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RAPGEF4-AS1 (RAPGEF4 antisense RNA 1)

Identity

Alias_namesRAPGEF4 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) RAPGEF4-AS1
LocusID (NCBI) 91149
Atlas_Id 72488
Location 2q31.1  [Link to chromosome band 2q31]
Location_base_pair Starts at 172723190 and ends at 172736206 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RAPGEF4-AS1   28081
Cards
Entrez_Gene (NCBI)RAPGEF4-AS1  91149  RAPGEF4 antisense RNA 1
Aliases
GeneCards (Weizmann)RAPGEF4-AS1
Ensembl hg19 (Hinxton)ENSG00000228016 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000228016 [Gene_View]  chr2:172723190-172736206 [Contig_View]  RAPGEF4-AS1 [Vega]
ICGC DataPortalENSG00000228016
TCGA cBioPortalRAPGEF4-AS1
AceView (NCBI)RAPGEF4-AS1
Genatlas (Paris)RAPGEF4-AS1
WikiGenes91149
SOURCE (Princeton)RAPGEF4-AS1
Genetics Home Reference (NIH)RAPGEF4-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)RAPGEF4-AS1  -     chr2:172723190-172736206 -  2q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RAPGEF4-AS1  -     2q31.1   [Description]    (hg19-Feb_2009)
EnsemblRAPGEF4-AS1 - 2q31.1 [CytoView hg19]  RAPGEF4-AS1 - 2q31.1 [CytoView hg38]
Mapping of homologs : NCBIRAPGEF4-AS1 [Mapview hg19]  RAPGEF4-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL157450 EU831901 EU831996
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RAPGEF4-AS1
Cluster EST : UnigeneHs.711021 [ NCBI ]
CGAP (NCI)Hs.711021
Alternative Splicing GalleryENSG00000228016
Gene ExpressionRAPGEF4-AS1 [ NCBI-GEO ]   RAPGEF4-AS1 [ EBI - ARRAY_EXPRESS ]   RAPGEF4-AS1 [ SEEK ]   RAPGEF4-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)RAPGEF4-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)91149
GTEX Portal (Tissue expression)RAPGEF4-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RAPGEF4-AS1
DMDM Disease mutations91149
Blocks (Seattle)RAPGEF4-AS1
Human Protein AtlasENSG00000228016
Protein Interaction databases
FunCoupENSG00000228016
BioGRIDRAPGEF4-AS1
STRING (EMBL)RAPGEF4-AS1
ZODIACRAPGEF4-AS1
Ontologies - Pathways
Huge Navigator RAPGEF4-AS1 [HugePedia]
snp3D : Map Gene to Disease91149
BioCentury BCIQRAPGEF4-AS1
ClinGenRAPGEF4-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD91149
Clinical trialRAPGEF4-AS1
Miscellaneous
canSAR (ICR)RAPGEF4-AS1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRAPGEF4-AS1
EVEXRAPGEF4-AS1
GoPubMedRAPGEF4-AS1
iHOPRAPGEF4-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:35:51 CEST 2017

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