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RARA-AS1 (RARA antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) RARA-AS1
LocusID (NCBI) 101929693
Atlas_Id 72490
Location 17q21.2  [Link to chromosome band 17q21]
Location_base_pair Starts at 40340867 and ends at 40343136 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RARA-AS1   49577
Cards
Entrez_Gene (NCBI)RARA-AS1  101929693  RARA antisense RNA 1
Aliases
GeneCards (Weizmann)RARA-AS1
Ensembl hg19 (Hinxton)ENSG00000265666 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265666 [Gene_View]  chr17:40340867-40343136 [Contig_View]  RARA-AS1 [Vega]
ICGC DataPortalENSG00000265666
TCGA cBioPortalRARA-AS1
AceView (NCBI)RARA-AS1
Genatlas (Paris)RARA-AS1
WikiGenes101929693
SOURCE (Princeton)RARA-AS1
Genetics Home Reference (NIH)RARA-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)RARA-AS1  -     chr17:40340867-40343136 -  17q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RARA-AS1  -     17q21.2   [Description]    (hg19-Feb_2009)
EnsemblRARA-AS1 - 17q21.2 [CytoView hg19]  RARA-AS1 - 17q21.2 [CytoView hg38]
Mapping of homologs : NCBIRARA-AS1 [Mapview hg19]  RARA-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC038432
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RARA-AS1
Cluster EST : UnigeneHs.655717 [ NCBI ]
CGAP (NCI)Hs.655717
Alternative Splicing GalleryENSG00000265666
Gene ExpressionRARA-AS1 [ NCBI-GEO ]   RARA-AS1 [ EBI - ARRAY_EXPRESS ]   RARA-AS1 [ SEEK ]   RARA-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)RARA-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929693
GTEX Portal (Tissue expression)RARA-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RARA-AS1
DMDM Disease mutations101929693
Blocks (Seattle)RARA-AS1
Human Protein AtlasENSG00000265666
Protein Interaction databases
FunCoupENSG00000265666
BioGRIDRARA-AS1
STRING (EMBL)RARA-AS1
ZODIACRARA-AS1
Ontologies - Pathways
Huge Navigator RARA-AS1 [HugePedia]
snp3D : Map Gene to Disease101929693
BioCentury BCIQRARA-AS1
ClinGenRARA-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929693
Clinical trialRARA-AS1
Miscellaneous
canSAR (ICR)RARA-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRARA-AS1
EVEXRARA-AS1
GoPubMedRARA-AS1
iHOPRARA-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:35:51 CEST 2017

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