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RARG (retinoic acid receptor gamma)

Identity

Alias (NCBI)NR1B3
RARC
HGNC (Hugo) RARG
HGNC Alias symbRARC
NR1B3
HGNC Previous nameretinoic acid receptor, gamma
LocusID (NCBI) 5916
Atlas_Id 42049
Location 12q13.13  [Link to chromosome band 12q13]
Location_base_pair Starts at 53210569 and ends at 53220362 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
NCDN (1p34.3) / RARG (12q13.13)NUP98 (11p15.4) / RARG (12q13.13)RARG (12q13.13) / BCAS1 (20q13.2)
RARG (12q13.13) / TACC2 (10q26.13)RARG 12q13.13 / BCAS1 20q13.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

Other Leukemias implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(11;12)(p15;q13) NUP98/RARG

External links

Nomenclature
HGNC (Hugo)RARG   9866
Cards
Entrez_Gene (NCBI)RARG    retinoic acid receptor gamma
AliasesNR1B3; RARC
GeneCards (Weizmann)RARG
Ensembl hg19 (Hinxton)ENSG00000172819 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000172819 [Gene_View]  ENSG00000172819 [Sequence]  chr12:53210569-53220362 [Contig_View]  RARG [Vega]
ICGC DataPortalENSG00000172819
TCGA cBioPortalRARG
AceView (NCBI)RARG
Genatlas (Paris)RARG
SOURCE (Princeton)RARG
Genetics Home Reference (NIH)RARG
Genomic and cartography
GoldenPath hg38 (UCSC)RARG  -     chr12:53210569-53220362 -  12q13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RARG  -     12q13.13   [Description]    (hg19-Feb_2009)
GoldenPathRARG - 12q13.13 [CytoView hg19]  RARG - 12q13.13 [CytoView hg38]
ImmunoBaseENSG00000172819
Genome Data Viewer NCBIRARG [Mapview hg19]  
OMIM180190   
Gene and transcription
Genbank (Entrez)AB307689 AK290588 AK297023 AK297110 AK297277
RefSeq transcript (Entrez)NM_000966 NM_001042728 NM_001243730 NM_001243731 NM_001243732
Consensus coding sequences : CCDS (NCBI)RARG
Gene ExpressionRARG [ NCBI-GEO ]   RARG [ EBI - ARRAY_EXPRESS ]   RARG [ SEEK ]   RARG [ MEM ]
Gene Expression Viewer (FireBrowse)RARG [ Firebrowse - Broad ]
GenevisibleExpression of RARG in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)5916
GTEX Portal (Tissue expression)RARG
Human Protein AtlasENSG00000172819-RARG [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RARG
Human Protein Atlas [tissue]ENSG00000172819-RARG [tissue]
HPRD01573
Protein Interaction databases
BioGRIDRARG
STRING (EMBL)RARG
ZODIACRARG
Ontologies - Pathways
Litterature
PubMed101 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXRARG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:28:17 CEST 2021
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