Atlas of Genetics and Cytogenetics in Oncology and Haematology


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RASD2 (RASD family member 2)

Identity

Alias_namesRASD family
Alias_symbol (synonym)TEM2
Rhes
MGC:4834
Other alias
HGNC (Hugo) RASD2
LocusID (NCBI) 23551
Atlas_Id 43449
Location 22q12.3  [Link to chromosome band 22q12]
Location_base_pair Starts at 35541305 and ends at 35553998 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RASD2   18229
Cards
Entrez_Gene (NCBI)RASD2  23551  RASD family member 2
AliasesMGC:4834; Rhes; TEM2
GeneCards (Weizmann)RASD2
Ensembl hg19 (Hinxton)ENSG00000100302 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000100302 [Gene_View]  chr22:35541305-35553998 [Contig_View]  RASD2 [Vega]
ICGC DataPortalENSG00000100302
TCGA cBioPortalRASD2
AceView (NCBI)RASD2
Genatlas (Paris)RASD2
WikiGenes23551
SOURCE (Princeton)RASD2
Genetics Home Reference (NIH)RASD2
Genomic and cartography
GoldenPath hg38 (UCSC)RASD2  -     chr22:35541305-35553998 +  22q12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RASD2  -     22q12.3   [Description]    (hg19-Feb_2009)
EnsemblRASD2 - 22q12.3 [CytoView hg19]  RASD2 - 22q12.3 [CytoView hg38]
Mapping of homologs : NCBIRASD2 [Mapview hg19]  RASD2 [Mapview hg38]
OMIM612842   
Gene and transcription
Genbank (Entrez)AF279143 AL831936 BC013419 CR456477 CU013027
RefSeq transcript (Entrez)NM_014310
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RASD2
Cluster EST : UnigeneHs.474711 [ NCBI ]
CGAP (NCI)Hs.474711
Alternative Splicing GalleryENSG00000100302
Gene ExpressionRASD2 [ NCBI-GEO ]   RASD2 [ EBI - ARRAY_EXPRESS ]   RASD2 [ SEEK ]   RASD2 [ MEM ]
Gene Expression Viewer (FireBrowse)RASD2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23551
GTEX Portal (Tissue expression)RASD2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96D21   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96D21  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96D21
Splice isoforms : SwissVarQ96D21
PhosPhoSitePlusQ96D21
Domaine pattern : Prosite (Expaxy)RAS (PS51421)   
Domains : Interpro (EBI)P-loop_NTPase    Small_GTP-bd_dom    Small_GTPase    Small_GTPase_Ras   
Domain families : Pfam (Sanger)Ras (PF00071)   
Domain families : Pfam (NCBI)pfam00071   
Conserved Domain (NCBI)RASD2
DMDM Disease mutations23551
Blocks (Seattle)RASD2
SuperfamilyQ96D21
Human Protein AtlasENSG00000100302
Peptide AtlasQ96D21
HPRD15210
IPIIPI00304150   
Protein Interaction databases
DIP (DOE-UCLA)Q96D21
IntAct (EBI)Q96D21
FunCoupENSG00000100302
BioGRIDRASD2
STRING (EMBL)RASD2
ZODIACRASD2
Ontologies - Pathways
QuickGOQ96D21
Ontology : AmiGOsynaptic transmission, dopaminergic  GTPase activity  GTP binding  intracellular  plasma membrane  small GTPase mediated signal transduction  locomotory behavior  negative regulation of protein ubiquitination  ubiquitin conjugating enzyme binding  G-protein beta-subunit binding  positive regulation of protein sumoylation  phosphatidylinositol 3-kinase binding  regulation of cAMP-mediated signaling  positive regulation of protein kinase B signaling  
Ontology : EGO-EBIsynaptic transmission, dopaminergic  GTPase activity  GTP binding  intracellular  plasma membrane  small GTPase mediated signal transduction  locomotory behavior  negative regulation of protein ubiquitination  ubiquitin conjugating enzyme binding  G-protein beta-subunit binding  positive regulation of protein sumoylation  phosphatidylinositol 3-kinase binding  regulation of cAMP-mediated signaling  positive regulation of protein kinase B signaling  
NDEx NetworkRASD2
Atlas of Cancer Signalling NetworkRASD2
Wikipedia pathwaysRASD2
Orthology - Evolution
OrthoDB23551
GeneTree (enSembl)ENSG00000100302
Phylogenetic Trees/Animal Genes : TreeFamRASD2
HOVERGENQ96D21
HOGENOMQ96D21
Homologs : HomoloGeneRASD2
Homology/Alignments : Family Browser (UCSC)RASD2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRASD2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RASD2
dbVarRASD2
ClinVarRASD2
1000_GenomesRASD2 
Exome Variant ServerRASD2
ExAC (Exome Aggregation Consortium)RASD2 (select the gene name)
Genetic variants : HAPMAP23551
Genomic Variants (DGV)RASD2 [DGVbeta]
DECIPHERRASD2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRASD2 
Mutations
ICGC Data PortalRASD2 
TCGA Data PortalRASD2 
Broad Tumor PortalRASD2
OASIS PortalRASD2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRASD2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRASD2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RASD2
DgiDB (Drug Gene Interaction Database)RASD2
DoCM (Curated mutations)RASD2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RASD2 (select a term)
intoGenRASD2
Cancer3DRASD2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612842   
Orphanet
MedgenRASD2
Genetic Testing Registry RASD2
NextProtQ96D21 [Medical]
TSGene23551
GENETestsRASD2
Target ValidationRASD2
Huge Navigator RASD2 [HugePedia]
snp3D : Map Gene to Disease23551
BioCentury BCIQRASD2
ClinGenRASD2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23551
Chemical/Pharm GKB GenePA34237
Clinical trialRASD2
Miscellaneous
canSAR (ICR)RASD2 (select the gene name)
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRASD2
EVEXRASD2
GoPubMedRASD2
iHOPRASD2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:52:37 CEST 2017

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