Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

RASL10A (RAS like family 10 member A)

Identity

Alias_namesRAS-like, family 10, member A
RAS-like family 10 member A
Alias_symbol (synonym)RRP22
Other alias
HGNC (Hugo) RASL10A
LocusID (NCBI) 10633
Atlas_Id 43485
Location 22q12.2  [Link to chromosome band 22q12]
Location_base_pair Starts at 29312933 and ends at 29315756 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
RASL10A (22q12.2) / RASL10A (22q12.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RASL10A   16954
Cards
Entrez_Gene (NCBI)RASL10A  10633  RAS like family 10 member A
AliasesRRP22
GeneCards (Weizmann)RASL10A
Ensembl hg19 (Hinxton)ENSG00000100276 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000100276 [Gene_View]  chr22:29312933-29315756 [Contig_View]  RASL10A [Vega]
ICGC DataPortalENSG00000100276
TCGA cBioPortalRASL10A
AceView (NCBI)RASL10A
Genatlas (Paris)RASL10A
WikiGenes10633
SOURCE (Princeton)RASL10A
Genetics Home Reference (NIH)RASL10A
Genomic and cartography
GoldenPath hg38 (UCSC)RASL10A  -     chr22:29312933-29315756 -  22q12.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RASL10A  -     22q12.2   [Description]    (hg19-Feb_2009)
EnsemblRASL10A - 22q12.2 [CytoView hg19]  RASL10A - 22q12.2 [CytoView hg38]
Mapping of homologs : NCBIRASL10A [Mapview hg19]  RASL10A [Mapview hg38]
OMIM602220   
Gene and transcription
Genbank (Entrez)BC022473 BC040434 BC050739 BC058077 BF436320
RefSeq transcript (Entrez)NM_001007279 NM_006477
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RASL10A
Cluster EST : UnigeneHs.73088 [ NCBI ]
CGAP (NCI)Hs.73088
Alternative Splicing GalleryENSG00000100276
Gene ExpressionRASL10A [ NCBI-GEO ]   RASL10A [ EBI - ARRAY_EXPRESS ]   RASL10A [ SEEK ]   RASL10A [ MEM ]
Gene Expression Viewer (FireBrowse)RASL10A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10633
GTEX Portal (Tissue expression)RASL10A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ92737   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ92737  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ92737
Splice isoforms : SwissVarQ92737
PhosPhoSitePlusQ92737
Domaine pattern : Prosite (Expaxy)RAS (PS51421)   
Domains : Interpro (EBI)P-loop_NTPase    Small_GTPase    Small_GTPase_Ras   
Domain families : Pfam (Sanger)Ras (PF00071)   
Domain families : Pfam (NCBI)pfam00071   
Conserved Domain (NCBI)RASL10A
DMDM Disease mutations10633
Blocks (Seattle)RASL10A
SuperfamilyQ92737
Human Protein AtlasENSG00000100276
Peptide AtlasQ92737
HPRD03744
IPIIPI00023219   IPI00478878   
Protein Interaction databases
DIP (DOE-UCLA)Q92737
Q92737
FunCoupENSG00000100276
BioGRIDRASL10A
STRING (EMBL)RASL10A
ZODIACRASL10A
Ontologies - Pathways
QuickGOQ92737
Ontology : AmiGOGTPase activity  GTP binding  nucleolus  plasma membrane  small GTPase mediated signal transduction  
Ontology : EGO-EBIGTPase activity  GTP binding  nucleolus  plasma membrane  small GTPase mediated signal transduction  
NDEx NetworkRASL10A
Atlas of Cancer Signalling NetworkRASL10A
Wikipedia pathwaysRASL10A
Orthology - Evolution
OrthoDB10633
GeneTree (enSembl)ENSG00000100276
Phylogenetic Trees/Animal Genes : TreeFamRASL10A
HOVERGENQ92737
HOGENOMQ92737
Homologs : HomoloGeneRASL10A
Homology/Alignments : Family Browser (UCSC)RASL10A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRASL10A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RASL10A
dbVarRASL10A
ClinVarRASL10A
1000_GenomesRASL10A 
Exome Variant ServerRASL10A
ExAC (Exome Aggregation Consortium)RASL10A (select the gene name)
Genetic variants : HAPMAP10633
Genomic Variants (DGV)RASL10A [DGVbeta]
DECIPHERRASL10A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRASL10A 
Mutations
ICGC Data PortalRASL10A 
TCGA Data PortalRASL10A 
Broad Tumor PortalRASL10A
OASIS PortalRASL10A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRASL10A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRASL10A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RASL10A
DgiDB (Drug Gene Interaction Database)RASL10A
DoCM (Curated mutations)RASL10A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RASL10A (select a term)
intoGenRASL10A
Cancer3DRASL10A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602220   
Orphanet
MedgenRASL10A
Genetic Testing Registry RASL10A
NextProtQ92737 [Medical]
TSGene10633
GENETestsRASL10A
Target ValidationRASL10A
Huge Navigator RASL10A [HugePedia]
snp3D : Map Gene to Disease10633
BioCentury BCIQRASL10A
ClinGenRASL10A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10633
Chemical/Pharm GKB GenePA162400707
Clinical trialRASL10A
Miscellaneous
canSAR (ICR)RASL10A (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRASL10A
EVEXRASL10A
GoPubMedRASL10A
iHOPRASL10A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 25 19:28:10 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.