Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

RASL10B (RAS like family 10 member B)

Identity

Alias_namesRAS-like, family 10, member B
RAS-like family 10 member B
Alias_symbol (synonym)VTS58635
RRP17
Other alias
HGNC (Hugo) RASL10B
LocusID (NCBI) 91608
Atlas_Id 43459
Location 17q12  [Link to chromosome band 17q12]
Location_base_pair Starts at 35731660 and ends at 35743521 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)RASL10B   30295
Cards
Entrez_Gene (NCBI)RASL10B  91608  RAS like family 10 member B
AliasesRRP17; VTS58635
GeneCards (Weizmann)RASL10B
Ensembl hg19 (Hinxton)ENSG00000270885 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000270885 [Gene_View]  ENSG00000270885 [Sequence]  chr17:35731660-35743521 [Contig_View]  RASL10B [Vega]
ICGC DataPortalENSG00000270885
TCGA cBioPortalRASL10B
AceView (NCBI)RASL10B
Genatlas (Paris)RASL10B
WikiGenes91608
SOURCE (Princeton)RASL10B
Genetics Home Reference (NIH)RASL10B
Genomic and cartography
GoldenPath hg38 (UCSC)RASL10B  -     chr17:35731660-35743521 +  17q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RASL10B  -     17q12   [Description]    (hg19-Feb_2009)
EnsemblRASL10B - 17q12 [CytoView hg19]  RASL10B - 17q12 [CytoView hg38]
Mapping of homologs : NCBIRASL10B [Mapview hg19]  RASL10B [Mapview hg38]
OMIM612128   
Gene and transcription
Genbank (Entrez)AB047296 AK122652 BC041133 DA250459
RefSeq transcript (Entrez)NM_033315
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RASL10B
Cluster EST : UnigeneHs.744994 [ NCBI ]
CGAP (NCI)Hs.744994
Alternative Splicing GalleryENSG00000270885
Gene ExpressionRASL10B [ NCBI-GEO ]   RASL10B [ EBI - ARRAY_EXPRESS ]   RASL10B [ SEEK ]   RASL10B [ MEM ]
Gene Expression Viewer (FireBrowse)RASL10B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)91608
GTEX Portal (Tissue expression)RASL10B
Human Protein AtlasENSG00000270885-RASL10B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96S79   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96S79  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96S79
Splice isoforms : SwissVarQ96S79
PhosPhoSitePlusQ96S79
Domaine pattern : Prosite (Expaxy)RAS (PS51421)   
Domains : Interpro (EBI)P-loop_NTPase    Small_GTPase    Small_GTPase_Ras   
Domain families : Pfam (Sanger)Ras (PF00071)   
Domain families : Pfam (NCBI)pfam00071   
Conserved Domain (NCBI)RASL10B
DMDM Disease mutations91608
Blocks (Seattle)RASL10B
SuperfamilyQ96S79
Human Protein Atlas [tissue]ENSG00000270885-RASL10B [tissue]
Peptide AtlasQ96S79
HPRD15215
IPIIPI00045517   
Protein Interaction databases
DIP (DOE-UCLA)Q96S79
IntAct (EBI)Q96S79
FunCoupENSG00000270885
BioGRIDRASL10B
STRING (EMBL)RASL10B
ZODIACRASL10B
Ontologies - Pathways
QuickGOQ96S79
Ontology : AmiGOregulation of systemic arterial blood pressure by atrial natriuretic peptide  GTPase activity  GTP binding  plasma membrane  signal transduction  positive regulation of peptide hormone secretion  
Ontology : EGO-EBIregulation of systemic arterial blood pressure by atrial natriuretic peptide  GTPase activity  GTP binding  plasma membrane  signal transduction  positive regulation of peptide hormone secretion  
NDEx NetworkRASL10B
Atlas of Cancer Signalling NetworkRASL10B
Wikipedia pathwaysRASL10B
Orthology - Evolution
OrthoDB91608
GeneTree (enSembl)ENSG00000270885
Phylogenetic Trees/Animal Genes : TreeFamRASL10B
HOVERGENQ96S79
HOGENOMQ96S79
Homologs : HomoloGeneRASL10B
Homology/Alignments : Family Browser (UCSC)RASL10B
Gene fusions - Rearrangements
Fusion : QuiverRASL10B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRASL10B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RASL10B
dbVarRASL10B
ClinVarRASL10B
1000_GenomesRASL10B 
Exome Variant ServerRASL10B
ExAC (Exome Aggregation Consortium)ENSG00000270885
GNOMAD BrowserENSG00000270885
Varsome BrowserRASL10B
Genetic variants : HAPMAP91608
Genomic Variants (DGV)RASL10B [DGVbeta]
DECIPHERRASL10B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRASL10B 
Mutations
ICGC Data PortalRASL10B 
TCGA Data PortalRASL10B 
Broad Tumor PortalRASL10B
OASIS PortalRASL10B [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDRASL10B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RASL10B
DgiDB (Drug Gene Interaction Database)RASL10B
DoCM (Curated mutations)RASL10B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RASL10B (select a term)
intoGenRASL10B
Cancer3DRASL10B(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612128   
Orphanet
DisGeNETRASL10B
MedgenRASL10B
Genetic Testing Registry RASL10B
NextProtQ96S79 [Medical]
TSGene91608
GENETestsRASL10B
Target ValidationRASL10B
Huge Navigator RASL10B [HugePedia]
snp3D : Map Gene to Disease91608
BioCentury BCIQRASL10B
ClinGenRASL10B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD91608
Chemical/Pharm GKB GenePA134936888
Clinical trialRASL10B
Miscellaneous
canSAR (ICR)RASL10B (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRASL10B
EVEXRASL10B
GoPubMedRASL10B
iHOPRASL10B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Aug 27 11:48:24 CEST 2018
Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.