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RASL11A (RAS like family 11 member A)

Identity

HGNC (Hugo) RASL11A
LocusID (NCBI) 387496
Atlas_Id 46386
Location 13q12.2
Location_base_pair Starts at 27844464 and ends at 27847827 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
DHRS12 (13q14.3) / RASL11A (13q12.2)RASL11A (13q12.2) / DHRS12 (13q14.3)DHRS12 13q14.3 / RASL11A 13q12.2
RASL11A 13q12.2 / DHRS12 13q14.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RASL11A   23802
Cards
Entrez_Gene (NCBI)RASL11A  387496  RAS like family 11 member A
GeneCards (Weizmann)RASL11A
Ensembl hg19 (Hinxton)ENSG00000122035 [Gene_View]  chr13:27844464-27847827 [Contig_View]  RASL11A [Vega]
Ensembl hg38 (Hinxton)ENSG00000122035 [Gene_View]  chr13:27844464-27847827 [Contig_View]  RASL11A [Vega]
ICGC DataPortalENSG00000122035
TCGA cBioPortalRASL11A
AceView (NCBI)RASL11A
Genatlas (Paris)RASL11A
WikiGenes387496
SOURCE (Princeton)RASL11A
Genomic and cartography
GoldenPath hg19 (UCSC)RASL11A  -     chr13:27844464-27847827 +  13q12.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)RASL11A  -     13q12.2   [Description]    (hg38-Dec_2013)
EnsemblRASL11A - 13q12.2 [CytoView hg19]  RASL11A - 13q12.2 [CytoView hg38]
Mapping of homologs : NCBIRASL11A [Mapview hg19]  RASL11A [Mapview hg38]
OMIM612403   
Gene and transcription
Genbank (Entrez)AY439004 BC132703 BC136761 HQ258126
RefSeq transcript (Entrez)NM_206827
RefSeq genomic (Entrez)NC_000013 NC_018924 NT_024524 NW_004929388
Consensus coding sequences : CCDS (NCBI)RASL11A
Cluster EST : UnigeneHs.192131 [ NCBI ]
CGAP (NCI)Hs.192131
Alternative Splicing : Fast-db (Paris)GSHG0008008
Alternative Splicing GalleryENSG00000122035
Gene ExpressionRASL11A [ NCBI-GEO ]   RASL11A [ EBI - ARRAY_EXPRESS ]   RASL11A [ SEEK ]   RASL11A [ MEM ]
Gene Expression Viewer (FireBrowse)RASL11A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)387496
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6T310 (Uniprot)
NextProtQ6T310  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6T310
Splice isoforms : SwissVarQ6T310 (Swissvar)
PhosPhoSitePlusQ6T310
Domaine pattern : Prosite (Expaxy)RAS (PS51421)   
Domains : Interpro (EBI)P-loop_NTPase    Small_GTP-bd_dom    Small_GTPase    Small_GTPase_Ras   
Domain families : Pfam (Sanger)Ras (PF00071)   
Domain families : Pfam (NCBI)pfam00071   
DMDM Disease mutations387496
Blocks (Seattle)RASL11A
SuperfamilyQ6T310
Human Protein AtlasENSG00000122035
Peptide AtlasQ6T310
HPRD17956
IPIIPI00156120   
Protein Interaction databases
DIP (DOE-UCLA)Q6T310
IntAct (EBI)Q6T310
FunCoupENSG00000122035
BioGRIDRASL11A
STRING (EMBL)RASL11A
ZODIACRASL11A
Ontologies - Pathways
QuickGOQ6T310
Ontology : AmiGOGTP binding  nucleolus  transcription, DNA-templated  small GTPase mediated signal transduction  protein transport  membrane  positive regulation of transcription from RNA polymerase I promoter  
Ontology : EGO-EBIGTP binding  nucleolus  transcription, DNA-templated  small GTPase mediated signal transduction  protein transport  membrane  positive regulation of transcription from RNA polymerase I promoter  
NDEx Network
Atlas of Cancer Signalling NetworkRASL11A
Wikipedia pathwaysRASL11A
Orthology - Evolution
OrthoDB387496
GeneTree (enSembl)ENSG00000122035
Phylogenetic Trees/Animal Genes : TreeFamRASL11A
Homologs : HomoloGeneRASL11A
Homology/Alignments : Family Browser (UCSC)RASL11A
Gene fusions - Rearrangements
Fusion: TCGADHRS12 13q14.3 RASL11A 13q12.2 BLCA
Fusion: TCGARASL11A 13q12.2 DHRS12 13q14.3 BLCA
Polymorphisms : SNP, variants
NCBI Variation ViewerRASL11A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RASL11A
dbVarRASL11A
ClinVarRASL11A
1000_GenomesRASL11A 
Exome Variant ServerRASL11A
ExAC (Exome Aggregation Consortium)RASL11A (select the gene name)
SNP (GeneSNP Utah)RASL11A
SNP : HGBaseRASL11A
Genetic variants : HAPMAPRASL11A
Genomic Variants (DGV)RASL11A [DGVbeta]
Mutations
ICGC Data PortalRASL11A 
TCGA Data PortalRASL11A 
Broad Tumor PortalRASL11A
OASIS PortalRASL11A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRASL11A 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RASL11A
DgiDB (Drug Gene Interaction Database)RASL11A
DoCM (Curated mutations)RASL11A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RASL11A (select a term)
intoGenRASL11A
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] 
Diseases
DECIPHER (Syndromes)13:27844464-27847827
CONAN: Copy Number AnalysisRASL11A 
Mutations and Diseases : HGMDRASL11A
OMIM612403   
MedgenRASL11A
Genetic Testing Registry RASL11A
NextProtQ6T310 [Medical]
TSGene387496
GENETestsRASL11A
Huge Navigator RASL11A [HugePedia]  RASL11A [HugeCancerGEM]
snp3D : Map Gene to Disease387496
BioCentury BCIQRASL11A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD387496
Chemical/Pharm GKB GenePA134906253
Clinical trialRASL11A
Miscellaneous
canSAR (ICR)RASL11A (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRASL11A
GoPubMedRASL11A
iHOPRASL11A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Apr 16 18:01:42 CEST 2016

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