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RASL12 (RAS like family 12)

Identity

Alias_namesRAS-like, family 12
RAS-like family 12
Alias_symbol (synonym)RIS
Other alias
HGNC (Hugo) RASL12
LocusID (NCBI) 51285
Atlas_Id 43460
Location 15q22.31  [Link to chromosome band 15q22]
Location_base_pair Starts at 65345675 and ends at 65360450 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RASL12   30289
Cards
Entrez_Gene (NCBI)RASL12  51285  RAS like family 12
AliasesRIS
GeneCards (Weizmann)RASL12
Ensembl hg19 (Hinxton)ENSG00000103710 [Gene_View]  chr15:65345675-65360450 [Contig_View]  RASL12 [Vega]
Ensembl hg38 (Hinxton)ENSG00000103710 [Gene_View]  chr15:65345675-65360450 [Contig_View]  RASL12 [Vega]
ICGC DataPortalENSG00000103710
TCGA cBioPortalRASL12
AceView (NCBI)RASL12
Genatlas (Paris)RASL12
WikiGenes51285
SOURCE (Princeton)RASL12
Genetics Home Reference (NIH)RASL12
Genomic and cartography
GoldenPath hg19 (UCSC)RASL12  -     chr15:65345675-65360450 -  15q22.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)RASL12  -     15q22.31   [Description]    (hg38-Dec_2013)
EnsemblRASL12 - 15q22.31 [CytoView hg19]  RASL12 - 15q22.31 [CytoView hg38]
Mapping of homologs : NCBIRASL12 [Mapview hg19]  RASL12 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF233588 AK296261 AK300536 AK314914 BC053734
RefSeq transcript (Entrez)NM_001307930 NM_016563
RefSeq genomic (Entrez)NC_000015 NC_018926 NT_010194 NW_004929398
Consensus coding sequences : CCDS (NCBI)RASL12
Cluster EST : UnigeneHs.27018 [ NCBI ]
CGAP (NCI)Hs.27018
Alternative Splicing GalleryENSG00000103710
Gene ExpressionRASL12 [ NCBI-GEO ]   RASL12 [ EBI - ARRAY_EXPRESS ]   RASL12 [ SEEK ]   RASL12 [ MEM ]
Gene Expression Viewer (FireBrowse)RASL12 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51285
GTEX Portal (Tissue expression)RASL12
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NYN1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NYN1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NYN1
Splice isoforms : SwissVarQ9NYN1
PhosPhoSitePlusQ9NYN1
Domaine pattern : Prosite (Expaxy)RAS (PS51421)   
Domains : Interpro (EBI)P-loop_NTPase    Small_GTP-bd_dom    Small_GTPase    Small_GTPase_Ras   
Domain families : Pfam (Sanger)Ras (PF00071)   
Domain families : Pfam (NCBI)pfam00071   
Conserved Domain (NCBI)RASL12
DMDM Disease mutations51285
Blocks (Seattle)RASL12
PDB (SRS)3C5C   
PDB (PDBSum)3C5C   
PDB (IMB)3C5C   
PDB (RSDB)3C5C   
Structural Biology KnowledgeBase3C5C   
SCOP (Structural Classification of Proteins)3C5C   
CATH (Classification of proteins structures)3C5C   
SuperfamilyQ9NYN1
Human Protein AtlasENSG00000103710
Peptide AtlasQ9NYN1
HPRD15217
IPIIPI00009813   IPI00789503   IPI00909979   
Protein Interaction databases
DIP (DOE-UCLA)Q9NYN1
IntAct (EBI)Q9NYN1
FunCoupENSG00000103710
BioGRIDRASL12
STRING (EMBL)RASL12
ZODIACRASL12
Ontologies - Pathways
QuickGOQ9NYN1
Ontology : AmiGOGTP binding  intracellular  small GTPase mediated signal transduction  protein transport  membrane  
Ontology : EGO-EBIGTP binding  intracellular  small GTPase mediated signal transduction  protein transport  membrane  
NDEx NetworkRASL12
Atlas of Cancer Signalling NetworkRASL12
Wikipedia pathwaysRASL12
Orthology - Evolution
OrthoDB51285
GeneTree (enSembl)ENSG00000103710
Phylogenetic Trees/Animal Genes : TreeFamRASL12
HOVERGENQ9NYN1
HOGENOMQ9NYN1
Homologs : HomoloGeneRASL12
Homology/Alignments : Family Browser (UCSC)RASL12
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRASL12 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RASL12
dbVarRASL12
ClinVarRASL12
1000_GenomesRASL12 
Exome Variant ServerRASL12
ExAC (Exome Aggregation Consortium)RASL12 (select the gene name)
Genetic variants : HAPMAP51285
Genomic Variants (DGV)RASL12 [DGVbeta]
DECIPHER (Syndromes)15:65345675-65360450  ENSG00000103710
CONAN: Copy Number AnalysisRASL12 
Mutations
ICGC Data PortalRASL12 
TCGA Data PortalRASL12 
Broad Tumor PortalRASL12
OASIS PortalRASL12 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRASL12  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRASL12
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RASL12
DgiDB (Drug Gene Interaction Database)RASL12
DoCM (Curated mutations)RASL12 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RASL12 (select a term)
intoGenRASL12
Cancer3DRASL12(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenRASL12
Genetic Testing Registry RASL12
NextProtQ9NYN1 [Medical]
TSGene51285
GENETestsRASL12
Huge Navigator RASL12 [HugePedia]
snp3D : Map Gene to Disease51285
BioCentury BCIQRASL12
ClinGenRASL12
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51285
Chemical/Pharm GKB GenePA134920029
Clinical trialRASL12
Miscellaneous
canSAR (ICR)RASL12 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRASL12
EVEXRASL12
GoPubMedRASL12
iHOPRASL12
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:24:29 CET 2017

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