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RASSF10 (Ras association domain family member 10)

Identity

Alias_namesRas association (RalGDS/AF-6) domain family (N-terminal) member 10
Other alias-
HGNC (Hugo) RASSF10
LocusID (NCBI) 644943
Atlas_Id 51432
Location 11p15.3  [Link to chromosome band 11p15]
Location_base_pair Starts at 13009423 and ends at 13012106 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RASSF10   33984
Cards
Entrez_Gene (NCBI)RASSF10  644943  Ras association domain family member 10
Aliases
GeneCards (Weizmann)RASSF10
Ensembl hg19 (Hinxton)ENSG00000189431 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000189431 [Gene_View]  chr11:13009423-13012106 [Contig_View]  RASSF10 [Vega]
ICGC DataPortalENSG00000189431
TCGA cBioPortalRASSF10
AceView (NCBI)RASSF10
Genatlas (Paris)RASSF10
WikiGenes644943
SOURCE (Princeton)RASSF10
Genetics Home Reference (NIH)RASSF10
Genomic and cartography
GoldenPath hg38 (UCSC)RASSF10  -     chr11:13009423-13012106 +  11p15.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RASSF10  -     11p15.3   [Description]    (hg19-Feb_2009)
EnsemblRASSF10 - 11p15.3 [CytoView hg19]  RASSF10 - 11p15.3 [CytoView hg38]
Mapping of homologs : NCBIRASSF10 [Mapview hg19]  RASSF10 [Mapview hg38]
OMIM614713   
Gene and transcription
Genbank (Entrez)BX098487
RefSeq transcript (Entrez)NM_001080521
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RASSF10
Cluster EST : UnigeneHs.134650 [ NCBI ]
CGAP (NCI)Hs.134650
Alternative Splicing GalleryENSG00000189431
Gene ExpressionRASSF10 [ NCBI-GEO ]   RASSF10 [ EBI - ARRAY_EXPRESS ]   RASSF10 [ SEEK ]   RASSF10 [ MEM ]
Gene Expression Viewer (FireBrowse)RASSF10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)644943
GTEX Portal (Tissue expression)RASSF10
Human Protein AtlasENSG00000189431-RASSF10 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NK89   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NK89  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NK89
Splice isoforms : SwissVarA6NK89
PhosPhoSitePlusA6NK89
Domaine pattern : Prosite (Expaxy)RA (PS50200)   
Domains : Interpro (EBI)N-RASSF    RA_dom    RASSF10    Ubiquitin-rel_dom   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RASSF10
DMDM Disease mutations644943
Blocks (Seattle)RASSF10
SuperfamilyA6NK89
Human Protein Atlas [tissue]ENSG00000189431-RASSF10 [tissue]
Peptide AtlasA6NK89
IPIIPI00049961   
Protein Interaction databases
DIP (DOE-UCLA)A6NK89
IntAct (EBI)A6NK89
FunCoupENSG00000189431
BioGRIDRASSF10
STRING (EMBL)RASSF10
ZODIACRASSF10
Ontologies - Pathways
QuickGOA6NK89
Ontology : AmiGOspindle pole  microtubule organizing center  cytosol  signal transduction  
Ontology : EGO-EBIspindle pole  microtubule organizing center  cytosol  signal transduction  
NDEx NetworkRASSF10
Atlas of Cancer Signalling NetworkRASSF10
Wikipedia pathwaysRASSF10
Orthology - Evolution
OrthoDB644943
GeneTree (enSembl)ENSG00000189431
Phylogenetic Trees/Animal Genes : TreeFamRASSF10
HOVERGENA6NK89
HOGENOMA6NK89
Homologs : HomoloGeneRASSF10
Homology/Alignments : Family Browser (UCSC)RASSF10
Gene fusions - Rearrangements
Fusion: Tumor Portal RASSF10
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRASSF10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RASSF10
dbVarRASSF10
ClinVarRASSF10
1000_GenomesRASSF10 
Exome Variant ServerRASSF10
ExAC (Exome Aggregation Consortium)ENSG00000189431
GNOMAD BrowserENSG00000189431
Genetic variants : HAPMAP644943
Genomic Variants (DGV)RASSF10 [DGVbeta]
DECIPHERRASSF10 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRASSF10 
Mutations
ICGC Data PortalRASSF10 
TCGA Data PortalRASSF10 
Broad Tumor PortalRASSF10
OASIS PortalRASSF10 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDRASSF10
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RASSF10
DgiDB (Drug Gene Interaction Database)RASSF10
DoCM (Curated mutations)RASSF10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RASSF10 (select a term)
intoGenRASSF10
Cancer3DRASSF10(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614713   
Orphanet
MedgenRASSF10
Genetic Testing Registry RASSF10
NextProtA6NK89 [Medical]
TSGene644943
GENETestsRASSF10
Target ValidationRASSF10
Huge Navigator RASSF10 [HugePedia]
snp3D : Map Gene to Disease644943
BioCentury BCIQRASSF10
ClinGenRASSF10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD644943
Chemical/Pharm GKB GenePA162400718
Clinical trialRASSF10
Miscellaneous
canSAR (ICR)RASSF10 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRASSF10
EVEXRASSF10
GoPubMedRASSF10
iHOPRASSF10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 13:08:09 CET 2017

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