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RB1-DT (RB1 divergent transcript)

Identity

Other aliasLINC00441
ncRNA-RB1
HGNC (Hugo) RB1-DT
LocusID (NCBI) 100862704
Atlas_Id 80592
Location 13q14.2  [Link to chromosome band 13q14]
Location_base_pair Starts at 48296513 and ends at 48303661 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)RB1-DT   42778
Cards
Entrez_Gene (NCBI)RB1-DT  100862704  RB1 divergent transcript
AliasesLINC00441; ncRNA-RB1
GeneCards (Weizmann)RB1-DT
Ensembl hg19 (Hinxton)ENSG00000231473 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000231473 [Gene_View]  ENSG00000231473 [Sequence]  chr13:48296513-48303661 [Contig_View]  RB1-DT [Vega]
ICGC DataPortalENSG00000231473
TCGA cBioPortalRB1-DT
AceView (NCBI)RB1-DT
Genatlas (Paris)RB1-DT
WikiGenes100862704
SOURCE (Princeton)RB1-DT
Genetics Home Reference (NIH)RB1-DT
Genomic and cartography
GoldenPath hg38 (UCSC)RB1-DT  -     chr13:48296513-48303661 -  13q14.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RB1-DT  -     13q14.2   [Description]    (hg19-Feb_2009)
GoldenPathRB1-DT - 13q14.2 [CytoView hg19]  RB1-DT - 13q14.2 [CytoView hg38]
ImmunoBaseENSG00000231473
Mapping of homologs : NCBIRB1-DT [Mapview hg19]  RB1-DT [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA804643 BC039553
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RB1-DT
Cluster EST : UnigeneHs.374221 [ NCBI ]
CGAP (NCI)Hs.374221
Alternative Splicing GalleryENSG00000231473
Gene ExpressionRB1-DT [ NCBI-GEO ]   RB1-DT [ EBI - ARRAY_EXPRESS ]   RB1-DT [ SEEK ]   RB1-DT [ MEM ]
Gene Expression Viewer (FireBrowse)RB1-DT [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100862704
GTEX Portal (Tissue expression)RB1-DT
Human Protein AtlasENSG00000231473-RB1-DT [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RB1-DT
DMDM Disease mutations100862704
Blocks (Seattle)RB1-DT
Human Protein Atlas [tissue]ENSG00000231473-RB1-DT [tissue]
Protein Interaction databases
FunCoupENSG00000231473
BioGRIDRB1-DT
STRING (EMBL)RB1-DT
ZODIACRB1-DT
Ontologies - Pathways
Huge Navigator RB1-DT [HugePedia]
snp3D : Map Gene to Disease100862704
BioCentury BCIQRB1-DT
ClinGenRB1-DT
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100862704
Clinical trialRB1-DT
Miscellaneous
canSAR (ICR)RB1-DT (select the gene name)
DataMed IndexRB1-DT
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRB1-DT
EVEXRB1-DT
GoPubMedRB1-DT
iHOPRB1-DT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 16:02:49 CEST 2019

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