Atlas of Genetics and Cytogenetics in Oncology and Haematology


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RBAKDN (RBAK downstream neighbor (non-protein coding))

Identity

Other alias-
HGNC (Hugo) RBAKDN
LocusID (NCBI) 389458
Atlas_Id 78201
Location 7p22.1  [Link to chromosome band 7p22]

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RBAKDN   33770
Cards
Entrez_Gene (NCBI)RBAKDN  389458  RBAK downstream neighbor (non-protein coding)
Aliases
GeneCards (Weizmann)RBAKDN
Ensembl hg19 (Hinxton)ENSG00000273313 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000273313 [Gene_View]  - [Contig_View]  RBAKDN [Vega]
ICGC DataPortalENSG00000273313
TCGA cBioPortalRBAKDN
AceView (NCBI)RBAKDN
Genatlas (Paris)RBAKDN
WikiGenes389458
SOURCE (Princeton)RBAKDN
Genetics Home Reference (NIH)RBAKDN
Genomic and cartography
GoldenPath hg38 (UCSC)RBAKDN  -  
GoldenPath hg19 (UCSC)RBAKDN  -  
EnsemblRBAKDN - [CytoView hg19]  RBAKDN - [CytoView hg38]
Mapping of homologs : NCBIRBAKDN [Mapview hg19]  RBAKDN [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA292828 AA398766 AI015600 AW138835 BC031661
RefSeq transcript (Entrez)NM_203393
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RBAKDN
Cluster EST : UnigeneHs.733005 [ NCBI ]
CGAP (NCI)Hs.733005
Alternative Splicing GalleryENSG00000273313
Gene ExpressionRBAKDN [ NCBI-GEO ]   RBAKDN [ EBI - ARRAY_EXPRESS ]   RBAKDN [ SEEK ]   RBAKDN [ MEM ]
Gene Expression Viewer (FireBrowse)RBAKDN [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)389458
GTEX Portal (Tissue expression)RBAKDN
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NC62   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NC62  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NC62
Splice isoforms : SwissVarA6NC62
PhosPhoSitePlusA6NC62
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RBAKDN
DMDM Disease mutations389458
Blocks (Seattle)RBAKDN
SuperfamilyA6NC62
Human Protein AtlasENSG00000273313
Peptide AtlasA6NC62
HPRD14212
IPIIPI00965849   
Protein Interaction databases
DIP (DOE-UCLA)A6NC62
IntAct (EBI)A6NC62
FunCoupENSG00000273313
BioGRIDRBAKDN
STRING (EMBL)RBAKDN
ZODIACRBAKDN
Ontologies - Pathways
QuickGOA6NC62
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkRBAKDN
Atlas of Cancer Signalling NetworkRBAKDN
Wikipedia pathwaysRBAKDN
Orthology - Evolution
OrthoDB389458
GeneTree (enSembl)ENSG00000273313
Phylogenetic Trees/Animal Genes : TreeFamRBAKDN
HOVERGENA6NC62
HOGENOMA6NC62
Homologs : HomoloGeneRBAKDN
Homology/Alignments : Family Browser (UCSC)RBAKDN
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRBAKDN [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RBAKDN
dbVarRBAKDN
ClinVarRBAKDN
1000_GenomesRBAKDN 
Exome Variant ServerRBAKDN
ExAC (Exome Aggregation Consortium)RBAKDN (select the gene name)
Genetic variants : HAPMAP389458
Genomic Variants (DGV)RBAKDN [DGVbeta]
DECIPHERRBAKDN [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRBAKDN 
Mutations
ICGC Data PortalRBAKDN 
TCGA Data PortalRBAKDN 
Broad Tumor PortalRBAKDN
OASIS PortalRBAKDN [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDRBAKDN
BioMutasearch RBAKDN
DgiDB (Drug Gene Interaction Database)RBAKDN
DoCM (Curated mutations)RBAKDN (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RBAKDN (select a term)
intoGenRBAKDN
Cancer3DRBAKDN(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenRBAKDN
Genetic Testing Registry RBAKDN
NextProtA6NC62 [Medical]
TSGene389458
GENETestsRBAKDN
Target ValidationRBAKDN
Huge Navigator RBAKDN [HugePedia]
snp3D : Map Gene to Disease389458
BioCentury BCIQRBAKDN
ClinGenRBAKDN
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD389458
Clinical trialRBAKDN
Miscellaneous
canSAR (ICR)RBAKDN (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRBAKDN
EVEXRBAKDN
GoPubMedRBAKDN
iHOPRBAKDN
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:35:53 CEST 2017

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