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RBBP8NL (RBBP8 N-terminal like)

Identity

Alias_namesC20orf151
chromosome 20 open reading frame 151
Alias_symbol (synonym)dJ908M14.3
Other alias
HGNC (Hugo) RBBP8NL
LocusID (NCBI) 140893
Atlas_Id 72505
Location 20q13.33  [Link to chromosome band 20q13]
Location_base_pair Starts at 62410237 and ends at 62427573 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RBBP8NL   16144
Cards
Entrez_Gene (NCBI)RBBP8NL  140893  RBBP8 N-terminal like
AliasesC20orf151
GeneCards (Weizmann)RBBP8NL
Ensembl hg19 (Hinxton)ENSG00000130701 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000130701 [Gene_View]  chr20:62410237-62427573 [Contig_View]  RBBP8NL [Vega]
ICGC DataPortalENSG00000130701
TCGA cBioPortalRBBP8NL
AceView (NCBI)RBBP8NL
Genatlas (Paris)RBBP8NL
WikiGenes140893
SOURCE (Princeton)RBBP8NL
Genetics Home Reference (NIH)RBBP8NL
Genomic and cartography
GoldenPath hg38 (UCSC)RBBP8NL  -     chr20:62410237-62427573 -  20q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RBBP8NL  -     20q13.33   [Description]    (hg19-Feb_2009)
EnsemblRBBP8NL - 20q13.33 [CytoView hg19]  RBBP8NL - 20q13.33 [CytoView hg38]
Mapping of homologs : NCBIRBBP8NL [Mapview hg19]  RBBP8NL [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK074919 AK128718 AK290299 BC006450 BC033142
RefSeq transcript (Entrez)NM_080833
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RBBP8NL
Cluster EST : UnigeneHs.180374 [ NCBI ]
CGAP (NCI)Hs.180374
Alternative Splicing GalleryENSG00000130701
Gene ExpressionRBBP8NL [ NCBI-GEO ]   RBBP8NL [ EBI - ARRAY_EXPRESS ]   RBBP8NL [ SEEK ]   RBBP8NL [ MEM ]
Gene Expression Viewer (FireBrowse)RBBP8NL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)140893
GTEX Portal (Tissue expression)RBBP8NL
Human Protein AtlasENSG00000130701-RBBP8NL [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NC74   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NC74  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NC74
Splice isoforms : SwissVarQ8NC74
PhosPhoSitePlusQ8NC74
Domains : Interpro (EBI)CtIP_N    RBBP8-like   
Domain families : Pfam (Sanger)CtIP_N (PF10482)   
Domain families : Pfam (NCBI)pfam10482   
Conserved Domain (NCBI)RBBP8NL
DMDM Disease mutations140893
Blocks (Seattle)RBBP8NL
SuperfamilyQ8NC74
Human Protein Atlas [tissue]ENSG00000130701-RBBP8NL [tissue]
Peptide AtlasQ8NC74
HPRD12751
IPIIPI00168344   IPI00443535   
Protein Interaction databases
DIP (DOE-UCLA)Q8NC74
IntAct (EBI)Q8NC74
FunCoupENSG00000130701
BioGRIDRBBP8NL
STRING (EMBL)RBBP8NL
ZODIACRBBP8NL
Ontologies - Pathways
QuickGOQ8NC74
Ontology : AmiGOextracellular space  
Ontology : EGO-EBIextracellular space  
NDEx NetworkRBBP8NL
Atlas of Cancer Signalling NetworkRBBP8NL
Wikipedia pathwaysRBBP8NL
Orthology - Evolution
OrthoDB140893
GeneTree (enSembl)ENSG00000130701
Phylogenetic Trees/Animal Genes : TreeFamRBBP8NL
HOVERGENQ8NC74
HOGENOMQ8NC74
Homologs : HomoloGeneRBBP8NL
Homology/Alignments : Family Browser (UCSC)RBBP8NL
Gene fusions - Rearrangements
Tumor Fusion PortalRBBP8NL
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRBBP8NL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RBBP8NL
dbVarRBBP8NL
ClinVarRBBP8NL
1000_GenomesRBBP8NL 
Exome Variant ServerRBBP8NL
ExAC (Exome Aggregation Consortium)ENSG00000130701
GNOMAD BrowserENSG00000130701
Genetic variants : HAPMAP140893
Genomic Variants (DGV)RBBP8NL [DGVbeta]
DECIPHERRBBP8NL [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRBBP8NL 
Mutations
ICGC Data PortalRBBP8NL 
TCGA Data PortalRBBP8NL 
Broad Tumor PortalRBBP8NL
OASIS PortalRBBP8NL [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDRBBP8NL
BioMutasearch RBBP8NL
DgiDB (Drug Gene Interaction Database)RBBP8NL
DoCM (Curated mutations)RBBP8NL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RBBP8NL (select a term)
intoGenRBBP8NL
Cancer3DRBBP8NL(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETRBBP8NL
MedgenRBBP8NL
Genetic Testing Registry RBBP8NL
NextProtQ8NC74 [Medical]
TSGene140893
GENETestsRBBP8NL
Target ValidationRBBP8NL
Huge Navigator RBBP8NL [HugePedia]
snp3D : Map Gene to Disease140893
BioCentury BCIQRBBP8NL
ClinGenRBBP8NL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD140893
Chemical/Pharm GKB GenePA25693
Clinical trialRBBP8NL
Miscellaneous
canSAR (ICR)RBBP8NL (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRBBP8NL
EVEXRBBP8NL
GoPubMedRBBP8NL
iHOPRBBP8NL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:42:08 CET 2017

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