RBM17 (RNA binding motif protein 17)

Identity

Other names	MGC14439
	SPF45
HGNC	RBM17
Location	10p15.1
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	RBM17   16944
Entrez_Gene	RBM17  84991  RNA binding motif protein 17
	Cards
GeneCards	RBM17
Ensembl	RBM17 [Search_View]   ENSG00000134453 [Gene_View]
Genatlas	RBM17
GeneLynx	RBM17
eGenome	RBM17
euGene	84991
	Genomic and cartography
GoldenPath	RBM17  -  10p15.1   chr10:6171013-6198847 +  10p15.1   [Description]    (hg18-March_2006)
Ensembl	RBM17 - 10p15.1 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	RBM17
	Gene and transcription
Genbank	AF542550 [ ENTREZ ]
Genbank	AK314952 [ ENTREZ ]
Genbank	BC007871 [ ENTREZ ]
Genbank	BC009064 [ ENTREZ ]
Genbank	BC039322 [ ENTREZ ]
RefSeq	NM_032905 [ SRS ]    NM_032905 [ ENTREZ ]
RefSeq	AC_000053 [ SRS ]    AC_000053 [ ENTREZ ]
RefSeq	AC_000142 [ SRS ]    AC_000142 [ ENTREZ ]
RefSeq	NC_000010 [ SRS ]    NC_000010 [ ENTREZ ]
RefSeq	NT_077569 [ SRS ]    NT_077569 [ ENTREZ ]
RefSeq	NW_001837931 [ SRS ]    NW_001837931 [ ENTREZ ]
RefSeq	NW_924584 [ SRS ]    NW_924584 [ ENTREZ ]
AceView	RBM17 AceView - NCBI
Unigene	Hs.498548 [ SRS ]    Hs.498548 [ NCBI ]     HS498548 [ spliceNest ]
Fast-db	1499 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q5W009 [ SRS]    Q5W009 [ EXPASY ]     Q5W009 [ INTERPRO ]     Q5W009 [ UNIPROT ]
Prosite	PS50174 G_PATCH [ SRS ]    PS50174 G_PATCH [ Expasy ]
Interpro	IPR012677 a_b_plait_nuc_bd [ SRS ]    IPR012677 a_b_plait_nuc_bd [ EBI ]
Interpro	IPR000467 G_patch [ SRS ]    IPR000467 G_patch [ EBI ]
Interpro	IPR003954 RRM_1 [ SRS ]    IPR003954 RRM_1 [ EBI ]
Interpro	IPR000504 RRM_RNP1 [ SRS ]    IPR000504 RRM_RNP1 [ EBI ]
Interpro	IPR016967 Splicing_factor_SPF45 [ SRS ]    IPR016967 Splicing_factor_SPF45 [ EBI ]
CluSTr	Q5W009
Pfam	PF01585 G-patch [ SRS ]    PF01585 G-patch [ Sanger ]    pfam01585 [ NCBI-CDD ]
Pfam	PF00076 RRM_1 [ SRS ]    PF00076 RRM_1 [ Sanger ]    pfam00076 [ NCBI-CDD ]
Smart	SM00443 G_patch [EMBL]
Smart	SM00361 RRM_1 [EMBL]
Blocks	Q5W009
HPRD	09501
	Protein Interaction databases
DIP	Q5W009
IntAct	Q5W009
	Polymorphism : SNP, mutations, diseases
OMIM	606935    [ map ]
GENECLINICS	606935
SNP	RBM17 [dbSNP-NCBI]
SNP	NM_032905 [SNP-NCI]
SNP	RBM17 [GeneSNPs - Utah]  RBM17] [HGBASE - SRS]
HAPMAP	RBM17 [HAPMAP]
HGMD	RBM17
	General knowledge
Family Browser	RBM17 [UCSC Family Browser]
SOURCE	NM_032905
SMD	Hs.498548
SAGE	Hs.498548
GO	nucleotide binding [Amigo]  nucleotide binding
GO	nucleic acid binding [Amigo]  nucleic acid binding
GO	RNA binding [Amigo]  RNA binding
GO	intracellular [Amigo]  intracellular
GO	nucleus [Amigo]  nucleus
GO	spliceosome [Amigo]  spliceosome
GO	mRNA processing [Amigo]  mRNA processing
GO	RNA splicing [Amigo]  RNA splicing
PubGene	RBM17
TreeFam	RBM17
CTD	84991 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	RBM17 Related clones (RZPD - Berlin)
	PubMed
PubMed	12 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Sep 29 18:18:47 2008