RBM39 (RNA binding motif protein 39)

2008-12-01  

Identity

HGNC
LOCATION
20q11.22
LOCUSID
ALIAS
CAPER,CAPERalpha,FSAP59,HCC1,RNPC2
FUSION GENES

Other Information

Locus ID:

NCBI: 9584
MIM: 604739
HGNC: 15923
Ensembl: ENSG00000131051

Variants:

dbSNP: 9584
ClinVar: 9584
TCGA: ENSG00000131051
COSMIC: RBM39

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000131051ENST00000253363Q14498
ENSG00000131051ENST00000253363A0A384NQ03
ENSG00000131051ENST00000338163G3XAC6
ENSG00000131051ENST00000361162Q14498
ENSG00000131051ENST00000374038Q5QP23
ENSG00000131051ENST00000397370A8MYG5
ENSG00000131051ENST00000403542F2Z3E6
ENSG00000131051ENST00000412738F2Z3E6
ENSG00000131051ENST00000416108F2Z3E6
ENSG00000131051ENST00000416529F8WF73
ENSG00000131051ENST00000425184H7BZG3
ENSG00000131051ENST00000426951H0Y6I9
ENSG00000131051ENST00000429968F2Z2Z5
ENSG00000131051ENST00000433027F8WF24
ENSG00000131051ENST00000434927Q5QP22
ENSG00000131051ENST00000444878F2Z3E6
ENSG00000131051ENST00000448303H0Y4X3
ENSG00000131051ENST00000449489F2Z3E6
ENSG00000131051ENST00000453310F2Z3E6
ENSG00000131051ENST00000455343F2Z3E6
ENSG00000131051ENST00000476806A0A087X122
ENSG00000131051ENST00000490484A0A0U1RQH7
ENSG00000131051ENST00000528062Q14498
ENSG00000131051ENST00000615771A0A0U1RQW2
ENSG00000131051ENST00000656873F2Z3E6

Expression (GTEx)

0
50
100
150
200
250

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
117046802002Molecular cloning and characterization of CAPER, a novel coactivator of activating protein-1 and estrogen receptors.42
193423712009Genetic ablation of caveolin-1 drives estrogen-hypersensitivity and the development of DCIS-like mammary lesions.26
220092612012CAPER-α alternative splicing regulates the expression of vascular endothelial growth factor₁₆₅ in Ewing sarcoma cells.22
187532122008CAPERalpha is a novel Rel-TAD-interacting factor that inhibits lymphocyte transformation by the potent Rel/NF-kappaB oncoprotein v-Rel.19
247950462014Cancer-relevant splicing factor CAPERα engages the essential splicing factor SF3b155 in a specific ternary complex.15
227115432012CSE1L, DIDO1 and RBM39 in colorectal adenoma to carcinoma progression.12
270501292016UHM-ULM interactions in the RBM39-U2AF65 splicing-factor complex.12
273541162016Global regulation of alternative RNA splicing by the SR-rich protein RBM39.10
246215032014CAPER, a novel regulator of human breast cancer progression.6
246436822014Overexpression of HCC1/CAPERα may play a role in lung cancer carcinogenesis.5

Citation

Dessen P

RBM39 (RNA binding motif protein 39)

Atlas Genet Cytogenet Oncol Haematol. 2008-12-01

Online version: http://atlasgeneticsoncology.org/gene/50557/rbm39