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RBM41 (RNA binding motif protein 41)

Identity

Alias_symbol (synonym)FLJ11016
Other alias-
HGNC (Hugo) RBM41
LocusID (NCBI) 55285
Atlas_Id 72524
Location Xq22.3  [Link to chromosome band Xq22]
Location_base_pair Starts at 106305118 and ends at 106362057 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RBM41   25617
Cards
Entrez_Gene (NCBI)RBM41  55285  RNA binding motif protein 41
Aliases
GeneCards (Weizmann)RBM41
Ensembl hg19 (Hinxton) [Gene_View]  chrX:106305118-106362057 [Contig_View]  RBM41 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chrX:106305118-106362057 [Contig_View]  RBM41 [Vega]
TCGA cBioPortalRBM41
AceView (NCBI)RBM41
Genatlas (Paris)RBM41
WikiGenes55285
SOURCE (Princeton)RBM41
Genetics Home Reference (NIH)RBM41
Genomic and cartography
GoldenPath hg19 (UCSC)RBM41  -     chrX:106305118-106362057 -  Xq22.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)RBM41  -     Xq22.3   [Description]    (hg38-Dec_2013)
EnsemblRBM41 - Xq22.3 [CytoView hg19]  RBM41 - Xq22.3 [CytoView hg38]
Mapping of homologs : NCBIRBM41 [Mapview hg19]  RBM41 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK001878 AK023732 AL832966 BC006986 DA255574
RefSeq transcript (Entrez)NM_001171080 NM_018301
RefSeq genomic (Entrez)NC_000023 NC_018934 NG_016385 NT_011651 NW_004929444
Consensus coding sequences : CCDS (NCBI)RBM41
Cluster EST : UnigeneHs.139053 [ NCBI ]
CGAP (NCI)Hs.139053
Gene ExpressionRBM41 [ NCBI-GEO ]   RBM41 [ EBI - ARRAY_EXPRESS ]   RBM41 [ SEEK ]   RBM41 [ MEM ]
Gene Expression Viewer (FireBrowse)RBM41 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55285
GTEX Portal (Tissue expression)RBM41
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96IZ5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96IZ5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96IZ5
Splice isoforms : SwissVarQ96IZ5
PhosPhoSitePlusQ96IZ5
Domaine pattern : Prosite (Expaxy)RRM (PS50102)   
Domains : Interpro (EBI)Nucleotide-bd_a/b_plait    RRM_dom   
Domain families : Pfam (Sanger)RRM_1 (PF00076)   
Domain families : Pfam (NCBI)pfam00076   
Domain families : Smart (EMBL)RRM (SM00360)  
Conserved Domain (NCBI)RBM41
DMDM Disease mutations55285
Blocks (Seattle)RBM41
PDB (SRS)2CPX   
PDB (PDBSum)2CPX   
PDB (IMB)2CPX   
PDB (RSDB)2CPX   
Structural Biology KnowledgeBase2CPX   
SCOP (Structural Classification of Proteins)2CPX   
CATH (Classification of proteins structures)2CPX   
SuperfamilyQ96IZ5
Peptide AtlasQ96IZ5
HPRD06515
IPIIPI00306343   IPI00643333   IPI00844169   IPI00017927   
Protein Interaction databases
DIP (DOE-UCLA)Q96IZ5
IntAct (EBI)Q96IZ5
BioGRIDRBM41
STRING (EMBL)RBM41
ZODIACRBM41
Ontologies - Pathways
QuickGOQ96IZ5
Ontology : AmiGOnucleotide binding  RNA binding  protein binding  
Ontology : EGO-EBInucleotide binding  RNA binding  protein binding  
NDEx NetworkRBM41
Atlas of Cancer Signalling NetworkRBM41
Wikipedia pathwaysRBM41
Orthology - Evolution
OrthoDB55285
Phylogenetic Trees/Animal Genes : TreeFamRBM41
HOVERGENQ96IZ5
HOGENOMQ96IZ5
Homologs : HomoloGeneRBM41
Homology/Alignments : Family Browser (UCSC)RBM41
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRBM41 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RBM41
dbVarRBM41
ClinVarRBM41
1000_GenomesRBM41 
Exome Variant ServerRBM41
ExAC (Exome Aggregation Consortium)RBM41 (select the gene name)
Genetic variants : HAPMAP55285
Genomic Variants (DGV)RBM41 [DGVbeta]
DECIPHER (Syndromes)X:106305118-106362057  
CONAN: Copy Number AnalysisRBM41 
Mutations
ICGC Data PortalRBM41 
TCGA Data PortalRBM41 
Broad Tumor PortalRBM41
OASIS PortalRBM41 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRBM41  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRBM41
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch RBM41
DgiDB (Drug Gene Interaction Database)RBM41
DoCM (Curated mutations)RBM41 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RBM41 (select a term)
intoGenRBM41
Cancer3DRBM41(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenRBM41
Genetic Testing Registry RBM41
NextProtQ96IZ5 [Medical]
TSGene55285
GENETestsRBM41
Huge Navigator RBM41 [HugePedia]
snp3D : Map Gene to Disease55285
BioCentury BCIQRBM41
ClinGenRBM41
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55285
Chemical/Pharm GKB GenePA145148155
Clinical trialRBM41
Miscellaneous
canSAR (ICR)RBM41 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRBM41
EVEXRBM41
GoPubMedRBM41
iHOPRBM41
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:40:40 CET 2017

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