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RCAN2 (regulator of calcineurin 2)

Identity

Other namesCSP2
DSCR1L1
MCIP2
RCN2
ZAKI-4
ZAKI4
HGNC (Hugo) RCAN2
LocusID (NCBI) 10231
Location 6p21.1
Location_base_pair Starts at 46188467 and ends at 46459804 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)RCAN2   3041
Entrez_Gene (NCBI)RCAN2  10231  regulator of calcineurin 2
Cards
GeneCards (Weizmann)RCAN2
Ensembl (Hinxton)ENSG00000172348 [Gene_View]  chr6:46188467-46459804 [Contig_View]  RCAN2 [Vega]
AceView (NCBI)RCAN2
Genatlas (Paris)RCAN2
SOURCE (Stanford)NM_001251973 NM_001251974 NM_005822
Genomic and cartography
GoldenPath (UCSC)RCAN2  -  6p21.1   chr6:46188467-46459804 -  6p21.1   [Description]    (hg19-Feb_2009)
EnsemblRCAN2 - 6p21.1 [CytoView]
Mapping of homologs : NCBIRCAN2 [Mapview]
OMIM604876   
Gene and transcription
Genbank (Entrez)AI813911 AK090990 AK312392 AY034085 AY034086
RefSeq transcript (SRS)NM_001251973 NM_001251974 NM_005822
RefSeq transcript (Entrez)NM_001251973 NM_001251974 NM_005822
RefSeq genomic (SRS)AC_000138 NC_000006 NC_018917 NG_030437 NT_007592 NW_001838981 NW_004078026
RefSeq genomic (Entrez)AC_000138 NC_000006 NC_018917 NG_030437 NT_007592 NW_001838981 NW_004078026
Consensus coding sequences : CCDS (NCBI)RCAN2
Cluster EST : UnigeneHs.710016 [ SRS ] Hs.710016 [ NCBI ]
CGAP (NCI)Hs.710016
Alternative Splicing : Fast-db (Paris)GSHG0026653
Alternative Splicing GalleryENSG00000172348
Gene ExpressionRCAN2 [ NCBI-GEO ]   RCAN2 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14206 (SRS) Q14206 (Uniprot)
NextProtQ14206
With graphics : InterProQ14206
Splice isoforms : SwissVarQ14206(Swissvar)
Domains : Interpro (SRS)Calcipressin    Nucleotide-bd_a/b_plait   
Domains : Interpro (EBI)Calcipressin    Nucleotide-bd_a/b_plait   
Related proteins : CluSTrQ14206
Domain families : Pfam (SRS)Calcipressin (PF04847)   
Domain families : Pfam (Sanger)Calcipressin (PF04847)   
Domain families : Pfam (NCBI)pfam04847   
DMDM10231
Blocks (Seattle)Q14206
Human Protein AtlasENSG00000172348
HPRD05342
IPIIPI00166041   IPI00029490   
Protein Interaction databases
DIP (DOE-UCLA)Q14206
IntAct (EBI)Q14206
FunCoupENSG00000172348
REACTOMERCAN2
Protein Interaction Database10231
BioGRIDRCAN2
InParanoidQ14206
Interologous Interaction database Q14206
IntegromeDBRCAN2
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)RCAN2
SNP (GeneSNP Utah)RCAN2
SNP : HGBaseRCAN2
Genetic variants : HAPMAPRCAN2
Somatic Mutations in Cancer : COSMICRCAN2 
CONAN: Copy Number AnalysisRCAN2 
Mutations and Diseases : HGMDRCAN2
OMIM604876   
GENETests604876   
Disease Genetic AssociationRCAN2
Huge Navigator RCAN2 [HugePedia]  RCAN2 [HugeCancerGEM]
Genomic VariantsRCAN2  RCAN2 [DGVbeta]
snp3D : Map Gene to Disease10231
General knowledge
Homologs : HomoloGeneRCAN2
Homology/Alignments : Family Browser (UCSC)RCAN2
Phylogenetic Trees/Animal Genes : TreeFamRCAN2
Chemical/Protein Interactions : CTD10231
Chemical/Pharm GKB GenePA162400959
Clinical trialRCAN2
Cancer Resource (Charite)ENSG00000172348
Ontology : AmiGOnucleotide binding  cellular_component  central nervous system development  calcium-mediated signaling  protein phosphatase 2B binding  
Ontology : EGO-EBInucleotide binding  cellular_component  central nervous system development  calcium-mediated signaling  protein phosphatase 2B binding  
Other databases
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
PubGeneRCAN2
iHOPRCAN2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:44:07 CEST 2013
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