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RD3L (RD3 like)

Identity

Alias (NCBI)TDRD9-AS1
TDRD9AS1
HGNC (Hugo) RD3L
HGNC Alias symbTDRD9AS1
HGNC Alias nameTDRD9 antisense 1
HGNC Previous nameTDRD9-AS1
LocusID (NCBI) 647286
Atlas_Id 72562
Location 14q32.33  [Link to chromosome band 14q32]
Location_base_pair Starts at 103940426 and ends at 103942529 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)RD3L   40912
Cards
Entrez_Gene (NCBI)RD3L    RD3 like
AliasesTDRD9-AS1; TDRD9AS1
GeneCards (Weizmann)RD3L
Ensembl hg19 (Hinxton)ENSG00000227729 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227729 [Gene_View]  ENSG00000227729 [Sequence]  chr14:103940426-103942529 [Contig_View]  RD3L [Vega]
ICGC DataPortalENSG00000227729
TCGA cBioPortalRD3L
AceView (NCBI)RD3L
Genatlas (Paris)RD3L
SOURCE (Princeton)RD3L
Genetics Home Reference (NIH)RD3L
Genomic and cartography
GoldenPath hg38 (UCSC)RD3L  -     chr14:103940426-103942529 -  14q32.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RD3L  -     14q32.33   [Description]    (hg19-Feb_2009)
GoldenPathRD3L - 14q32.33 [CytoView hg19]  RD3L - 14q32.33 [CytoView hg38]
ImmunoBaseENSG00000227729
Genome Data Viewer NCBIRD3L [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BQ184214 BQ185906 BX117646
RefSeq transcript (Entrez)NM_001257268
Consensus coding sequences : CCDS (NCBI)RD3L
Gene ExpressionRD3L [ NCBI-GEO ]   RD3L [ EBI - ARRAY_EXPRESS ]   RD3L [ SEEK ]   RD3L [ MEM ]
Gene Expression Viewer (FireBrowse)RD3L [ Firebrowse - Broad ]
GenevisibleExpression of RD3L in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)647286
GTEX Portal (Tissue expression)RD3L
Human Protein AtlasENSG00000227729-RD3L [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0DJH9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0DJH9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0DJH9
PhosPhoSitePlusP0DJH9
Domains : Interpro (EBI)RD3   
Domain families : Pfam (Sanger)RD3 (PF14473)   
Domain families : Pfam (NCBI)pfam14473   
Conserved Domain (NCBI)RD3L
SuperfamilyP0DJH9
AlphaFold pdb e-kbP0DJH9   
Human Protein Atlas [tissue]ENSG00000227729-RD3L [tissue]
Protein Interaction databases
DIP (DOE-UCLA)P0DJH9
IntAct (EBI)P0DJH9
BioGRIDRD3L
STRING (EMBL)RD3L
ZODIACRD3L
Ontologies - Pathways
QuickGOP0DJH9
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkRD3L
Atlas of Cancer Signalling NetworkRD3L
Wikipedia pathwaysRD3L
Orthology - Evolution
OrthoDB647286
GeneTree (enSembl)ENSG00000227729
Phylogenetic Trees/Animal Genes : TreeFamRD3L
Homologs : HomoloGeneRD3L
Homology/Alignments : Family Browser (UCSC)RD3L
Gene fusions - Rearrangements
Fusion : QuiverRD3L
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRD3L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RD3L
dbVarRD3L
ClinVarRD3L
MonarchRD3L
1000_GenomesRD3L 
Exome Variant ServerRD3L
GNOMAD BrowserENSG00000227729
Varsome BrowserRD3L
ACMGRD3L variants
VarityP0DJH9
Genomic Variants (DGV)RD3L [DGVbeta]
DECIPHERRD3L [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRD3L 
Mutations
ICGC Data PortalRD3L 
TCGA Data PortalRD3L 
Broad Tumor PortalRD3L
OASIS PortalRD3L [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRD3L  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DRD3L
Mutations and Diseases : HGMDRD3L
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaRD3L
DgiDB (Drug Gene Interaction Database)RD3L
DoCM (Curated mutations)RD3L
CIViC (Clinical Interpretations of Variants in Cancer)RD3L
Cancer3DRD3L
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETRD3L
MedgenRD3L
Genetic Testing Registry RD3L
NextProtP0DJH9 [Medical]
GENETestsRD3L
Target ValidationRD3L
Huge Navigator RD3L [HugePedia]
ClinGenRD3L
Clinical trials, drugs, therapy
MyCancerGenomeRD3L
Protein Interactions : CTDRD3L
Pharm GKB GenePA166049071
PharosP0DJH9
Clinical trialRD3L
Miscellaneous
canSAR (ICR)RD3L
HarmonizomeRD3L
DataMed IndexRD3L
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXRD3L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:18:10 CEST 2021

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