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RELL1 (RELT-like 1)

Identity

Alias_namesRELT-like 1
Other alias-
HGNC (Hugo) RELL1
LocusID (NCBI) 768211
Atlas_Id 72575
Location 4p14  [Link to chromosome band 4p14]
Location_base_pair Starts at 37592422 and ends at 37687999 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
RELL1 (4p14) / LGALS8 (1q43)RELL1 (4p14) / SLC43A2 (17p13.3)RELL1 (4p14) / XIAP (Xq25)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RELL1   27379
Cards
Entrez_Gene (NCBI)RELL1  768211  RELT-like 1
Aliases
GeneCards (Weizmann)RELL1
Ensembl hg19 (Hinxton)ENSG00000181826 [Gene_View]  chr4:37592422-37687999 [Contig_View]  RELL1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000181826 [Gene_View]  chr4:37592422-37687999 [Contig_View]  RELL1 [Vega]
ICGC DataPortalENSG00000181826
TCGA cBioPortalRELL1
AceView (NCBI)RELL1
Genatlas (Paris)RELL1
WikiGenes768211
SOURCE (Princeton)RELL1
Genetics Home Reference (NIH)RELL1
Genomic and cartography
GoldenPath hg19 (UCSC)RELL1  -     chr4:37592422-37687999 -  4p14   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)RELL1  -     4p14   [Description]    (hg38-Dec_2013)
EnsemblRELL1 - 4p14 [CytoView hg19]  RELL1 - 4p14 [CytoView hg38]
Mapping of homologs : NCBIRELL1 [Mapview hg19]  RELL1 [Mapview hg38]
OMIM611212   
Gene and transcription
Genbank (Entrez)AI016583 AK025431 AK075468 BC039540 DA400382
RefSeq transcript (Entrez)NM_001085399 NM_001085400
RefSeq genomic (Entrez)NC_000004 NC_018915 NT_006238 NW_004929317
Consensus coding sequences : CCDS (NCBI)RELL1
Cluster EST : UnigeneHs.283378 [ NCBI ]
CGAP (NCI)Hs.283378
Alternative Splicing GalleryENSG00000181826
Gene ExpressionRELL1 [ NCBI-GEO ]   RELL1 [ EBI - ARRAY_EXPRESS ]   RELL1 [ SEEK ]   RELL1 [ MEM ]
Gene Expression Viewer (FireBrowse)RELL1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)768211
GTEX Portal (Tissue expression)RELL1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IUW5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IUW5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IUW5
Splice isoforms : SwissVarQ8IUW5
PhosPhoSitePlusQ8IUW5
Domains : Interpro (EBI)TNF_rcpt_RELT   
Domain families : Pfam (Sanger)RELT (PF12606)   
Domain families : Pfam (NCBI)pfam12606   
Conserved Domain (NCBI)RELL1
DMDM Disease mutations768211
Blocks (Seattle)RELL1
SuperfamilyQ8IUW5
Human Protein AtlasENSG00000181826
Peptide AtlasQ8IUW5
IPIIPI00216890   IPI00965176   
Protein Interaction databases
DIP (DOE-UCLA)Q8IUW5
IntAct (EBI)Q8IUW5
FunCoupENSG00000181826
BioGRIDRELL1
STRING (EMBL)RELL1
ZODIACRELL1
Ontologies - Pathways
QuickGOQ8IUW5
Ontology : AmiGOplasma membrane  microtubule cytoskeleton  integral component of membrane  
Ontology : EGO-EBIplasma membrane  microtubule cytoskeleton  integral component of membrane  
NDEx NetworkRELL1
Atlas of Cancer Signalling NetworkRELL1
Wikipedia pathwaysRELL1
Orthology - Evolution
OrthoDB768211
GeneTree (enSembl)ENSG00000181826
Phylogenetic Trees/Animal Genes : TreeFamRELL1
HOVERGENQ8IUW5
HOGENOMQ8IUW5
Homologs : HomoloGeneRELL1
Homology/Alignments : Family Browser (UCSC)RELL1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRELL1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RELL1
dbVarRELL1
ClinVarRELL1
1000_GenomesRELL1 
Exome Variant ServerRELL1
ExAC (Exome Aggregation Consortium)RELL1 (select the gene name)
Genetic variants : HAPMAP768211
Genomic Variants (DGV)RELL1 [DGVbeta]
DECIPHER (Syndromes)4:37592422-37687999  ENSG00000181826
CONAN: Copy Number AnalysisRELL1 
Mutations
ICGC Data PortalRELL1 
TCGA Data PortalRELL1 
Broad Tumor PortalRELL1
OASIS PortalRELL1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRELL1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRELL1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RELL1
DgiDB (Drug Gene Interaction Database)RELL1
DoCM (Curated mutations)RELL1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RELL1 (select a term)
intoGenRELL1
Cancer3DRELL1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611212   
Orphanet
MedgenRELL1
Genetic Testing Registry RELL1
NextProtQ8IUW5 [Medical]
TSGene768211
GENETestsRELL1
Huge Navigator RELL1 [HugePedia]
snp3D : Map Gene to Disease768211
BioCentury BCIQRELL1
ClinGenRELL1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD768211
Chemical/Pharm GKB GenePA162401054
Clinical trialRELL1
Miscellaneous
canSAR (ICR)RELL1 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRELL1
EVEXRELL1
GoPubMedRELL1
iHOPRELL1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:40:52 CET 2017

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