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REPS1 (RALBP1 associated Eps domain containing 1)

Identity

Alias (NCBI)NBIA7
RALBP1
HGNC (Hugo) REPS1
LocusID (NCBI) 85021
Atlas_Id 45918
Location 6q24.1  [Link to chromosome band 6q24]
Location_base_pair Starts at 138904015 and ends at 138988261 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DIDO1 (20q13.33) / REPS1 (6q24.1)FMNL3 (12q13.12) / REPS1 (6q24.1)REPS1 (6q24.1) / ELMO1 (7p14.2)
REPS1 (6q24.1) / GTPBP1 (22q13.1)REPS1 (6q24.1) / PDE4D (5q11.2)REPS1 (6q24.1) / REPS1 (6q24.1)
REPS1 (6q24.1) / ZNF669 (1q44)SP140 (2q37.1) / REPS1 (6q24.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)REPS1   15578
Cards
Entrez_Gene (NCBI)REPS1    RALBP1 associated Eps domain containing 1
AliasesNBIA7; RALBP1
GeneCards (Weizmann)REPS1
Ensembl hg19 (Hinxton)ENSG00000135597 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000135597 [Gene_View]  ENSG00000135597 [Sequence]  chr6:138904015-138988261 [Contig_View]  REPS1 [Vega]
ICGC DataPortalENSG00000135597
TCGA cBioPortalREPS1
AceView (NCBI)REPS1
Genatlas (Paris)REPS1
SOURCE (Princeton)REPS1
Genetics Home Reference (NIH)REPS1
Genomic and cartography
GoldenPath hg38 (UCSC)REPS1  -     chr6:138904015-138988261 -  6q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)REPS1  -     6q24.1   [Description]    (hg19-Feb_2009)
GoldenPathREPS1 - 6q24.1 [CytoView hg19]  REPS1 - 6q24.1 [CytoView hg38]
ImmunoBaseENSG00000135597
Genome Data Viewer NCBIREPS1 [Mapview hg19]  
OMIM614825   617916   
Gene and transcription
Genbank (Entrez)AA025663 AA653442 AA706721 AB209143 AF251052
RefSeq transcript (Entrez)NM_001128617 NM_001286611 NM_001286612 NM_031922
Consensus coding sequences : CCDS (NCBI)REPS1
Gene ExpressionREPS1 [ NCBI-GEO ]   REPS1 [ EBI - ARRAY_EXPRESS ]   REPS1 [ SEEK ]   REPS1 [ MEM ]
Gene Expression Viewer (FireBrowse)REPS1 [ Firebrowse - Broad ]
GenevisibleExpression of REPS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)85021
GTEX Portal (Tissue expression)REPS1
Human Protein AtlasENSG00000135597-REPS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)REPS1
Human Protein Atlas [tissue]ENSG00000135597-REPS1 [tissue]
HPRD09687
Protein Interaction databases
BioGRIDREPS1
STRING (EMBL)REPS1
ZODIACREPS1
Ontologies - Pathways
Litterature
PubMed35 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXREPS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:28:40 CEST 2021

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