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RERG (RAS like estrogen regulated growth inhibitor)

Identity

Alias (NCBI)-
HGNC (Hugo) RERG
HGNC Alias symbMGC15754
HGNC Previous nameRAS-like, estrogen-regulated, growth inhibitor
LocusID (NCBI) 85004
Atlas_Id 42084
Location 12p12.3  [Link to chromosome band 12p12]
Location_base_pair Starts at 15107783 and ends at 15221417 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
SNX29 (16p13.13)::RERG (12p12.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)RERG   15980
Cards
Entrez_Gene (NCBI)RERG    RAS like estrogen regulated growth inhibitor
Aliases
GeneCards (Weizmann)RERG
Ensembl hg19 (Hinxton)ENSG00000134533 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000134533 [Gene_View]  ENSG00000134533 [Sequence]  chr12:15107783-15221417 [Contig_View]  RERG [Vega]
ICGC DataPortalENSG00000134533
TCGA cBioPortalRERG
AceView (NCBI)RERG
Genatlas (Paris)RERG
SOURCE (Princeton)RERG
Genetics Home Reference (NIH)RERG
Genomic and cartography
GoldenPath hg38 (UCSC)RERG  -     chr12:15107783-15221417 -  12p12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RERG  -     12p12.3   [Description]    (hg19-Feb_2009)
GoldenPathRERG - 12p12.3 [CytoView hg19]  RERG - 12p12.3 [CytoView hg38]
ImmunoBaseENSG00000134533
Genome Data Viewer NCBIRERG [Mapview hg19]  
OMIM612664   
Gene and transcription
Genbank (Entrez)AF339750 AI125943 AK295343 AK311016 AK313881
RefSeq transcript (Entrez)NM_001190726 NM_032918
Consensus coding sequences : CCDS (NCBI)RERG
Gene ExpressionRERG [ NCBI-GEO ]   RERG [ EBI - ARRAY_EXPRESS ]   RERG [ SEEK ]   RERG [ MEM ]
Gene Expression Viewer (FireBrowse)RERG [ Firebrowse - Broad ]
GenevisibleExpression of RERG in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)85004
GTEX Portal (Tissue expression)RERG
Human Protein AtlasENSG00000134533-RERG [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96A58   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96A58  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96A58
PhosPhoSitePlusQ96A58
Domaine pattern : Prosite (Expaxy)RAS (PS51421)   
Domains : Interpro (EBI)P-loop_NTPase    Small_GTP-bd_dom    Small_GTPase    Small_GTPase_Ras-type   
Domain families : Pfam (Sanger)Ras (PF00071)   
Domain families : Pfam (NCBI)pfam00071   
Conserved Domain (NCBI)RERG
PDB (RSDB)2ATV   
PDB Europe2ATV   
PDB (PDBSum)2ATV   
PDB (IMB)2ATV   
Structural Biology KnowledgeBase2ATV   
SCOP (Structural Classification of Proteins)2ATV   
CATH (Classification of proteins structures)2ATV   
SuperfamilyQ96A58
AlphaFold pdb e-kbQ96A58   
Human Protein Atlas [tissue]ENSG00000134533-RERG [tissue]
HPRD15238
Protein Interaction databases
DIP (DOE-UCLA)Q96A58
IntAct (EBI)Q96A58
BioGRIDRERG
STRING (EMBL)RERG
ZODIACRERG
Ontologies - Pathways
QuickGOQ96A58
Ontology : AmiGOfibrillar center  GTPase activity  GTPase activity  G protein activity  GTP binding  nucleus  nucleoplasm  cytosol  plasma membrane  small GTPase mediated signal transduction  Ras protein signal transduction  negative regulation of cell population proliferation  response to hormone  GDP binding  GDP binding  negative regulation of cell growth  estrogen receptor binding  
Ontology : EGO-EBIfibrillar center  GTPase activity  GTPase activity  G protein activity  GTP binding  nucleus  nucleoplasm  cytosol  plasma membrane  small GTPase mediated signal transduction  Ras protein signal transduction  negative regulation of cell population proliferation  response to hormone  GDP binding  GDP binding  negative regulation of cell growth  estrogen receptor binding  
NDEx NetworkRERG
Atlas of Cancer Signalling NetworkRERG
Wikipedia pathwaysRERG
Orthology - Evolution
OrthoDB85004
GeneTree (enSembl)ENSG00000134533
Phylogenetic Trees/Animal Genes : TreeFamRERG
Homologs : HomoloGeneRERG
Homology/Alignments : Family Browser (UCSC)RERG
Gene fusions - Rearrangements
Fusion : QuiverRERG
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRERG [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RERG
dbVarRERG
ClinVarRERG
MonarchRERG
1000_GenomesRERG 
Exome Variant ServerRERG
GNOMAD BrowserENSG00000134533
Varsome BrowserRERG
ACMGRERG variants
VarityQ96A58
Genomic Variants (DGV)RERG [DGVbeta]
DECIPHERRERG [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRERG 
Mutations
ICGC Data PortalRERG 
TCGA Data PortalRERG 
Broad Tumor PortalRERG
OASIS PortalRERG [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRERG  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DRERG
Mutations and Diseases : HGMDRERG
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaRERG
DgiDB (Drug Gene Interaction Database)RERG
DoCM (Curated mutations)RERG
CIViC (Clinical Interpretations of Variants in Cancer)RERG
Cancer3DRERG
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612664   
Orphanet
DisGeNETRERG
MedgenRERG
Genetic Testing Registry RERG
NextProtQ96A58 [Medical]
GENETestsRERG
Target ValidationRERG
Huge Navigator RERG [HugePedia]
ClinGenRERG
Clinical trials, drugs, therapy
MyCancerGenomeRERG
Protein Interactions : CTDRERG
Pharm GKB GenePA34333
PharosQ96A58
Clinical trialRERG
Miscellaneous
canSAR (ICR)RERG
HarmonizomeRERG
ARCHS4RERG
DataMed IndexRERG
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXRERG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jan 20 12:55:52 CET 2022

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