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RERGL (RERG like)

Identity

Alias_namesRERG/RAS-like
Alias_symbol (synonym)FLJ22655
Other alias-
HGNC (Hugo) RERGL
LocusID (NCBI) 79785
Atlas_Id 43265
Location 12p12.3  [Link to chromosome band 12p12]
Location_base_pair Starts at 18233803 and ends at 18243127 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
KRAS (12p12.1) / RERGL (12p12.3)RASSF8 (12p12.1) / RERGL (12p12.3)RERGL (12p12.3) / GRIK3 (1p34.3)
KRAS 12p12.1 / RERGL 12p12.3RASSF8 12p12.1 / RERGL 12p12.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RERGL   26213
Cards
Entrez_Gene (NCBI)RERGL  79785  RERG like
Aliases
GeneCards (Weizmann)RERGL
Ensembl hg19 (Hinxton)ENSG00000111404 [Gene_View]  chr12:18233803-18243127 [Contig_View]  RERGL [Vega]
Ensembl hg38 (Hinxton)ENSG00000111404 [Gene_View]  chr12:18233803-18243127 [Contig_View]  RERGL [Vega]
ICGC DataPortalENSG00000111404
TCGA cBioPortalRERGL
AceView (NCBI)RERGL
Genatlas (Paris)RERGL
WikiGenes79785
SOURCE (Princeton)RERGL
Genetics Home Reference (NIH)RERGL
Genomic and cartography
GoldenPath hg19 (UCSC)RERGL  -     chr12:18233803-18243127 -  12p12.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)RERGL  -     12p12.3   [Description]    (hg38-Dec_2013)
EnsemblRERGL - 12p12.3 [CytoView hg19]  RERGL - 12p12.3 [CytoView hg38]
Mapping of homologs : NCBIRERGL [Mapview hg19]  RERGL [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA220227 AK026308 BC042888 BX422875 DT220095
RefSeq transcript (Entrez)NM_001286201 NM_024730
RefSeq genomic (Entrez)NC_000012 NC_018923 NT_009714 NW_004929383
Consensus coding sequences : CCDS (NCBI)RERGL
Cluster EST : UnigeneHs.732831 [ NCBI ]
CGAP (NCI)Hs.732831
Alternative Splicing GalleryENSG00000111404
Gene ExpressionRERGL [ NCBI-GEO ]   RERGL [ EBI - ARRAY_EXPRESS ]   RERGL [ SEEK ]   RERGL [ MEM ]
Gene Expression Viewer (FireBrowse)RERGL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79785
GTEX Portal (Tissue expression)RERGL
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H628   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H628  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H628
Splice isoforms : SwissVarQ9H628
PhosPhoSitePlusQ9H628
Domaine pattern : Prosite (Expaxy)RAS (PS51421)   
Domains : Interpro (EBI)P-loop_NTPase    Small_GTPase    Small_GTPase_Ras   
Domain families : Pfam (Sanger)Ras (PF00071)   
Domain families : Pfam (NCBI)pfam00071   
Conserved Domain (NCBI)RERGL
DMDM Disease mutations79785
Blocks (Seattle)RERGL
SuperfamilyQ9H628
Human Protein AtlasENSG00000111404
Peptide AtlasQ9H628
HPRD08659
IPIIPI00015447   IPI01014334   IPI00790717   
Protein Interaction databases
DIP (DOE-UCLA)Q9H628
IntAct (EBI)Q9H628
FunCoupENSG00000111404
BioGRIDRERGL
STRING (EMBL)RERGL
ZODIACRERGL
Ontologies - Pathways
QuickGOQ9H628
Ontology : AmiGOGTP binding  intracellular  small GTPase mediated signal transduction  protein transport  membrane  
Ontology : EGO-EBIGTP binding  intracellular  small GTPase mediated signal transduction  protein transport  membrane  
NDEx NetworkRERGL
Atlas of Cancer Signalling NetworkRERGL
Wikipedia pathwaysRERGL
Orthology - Evolution
OrthoDB79785
GeneTree (enSembl)ENSG00000111404
Phylogenetic Trees/Animal Genes : TreeFamRERGL
HOVERGENQ9H628
HOGENOMQ9H628
Homologs : HomoloGeneRERGL
Homology/Alignments : Family Browser (UCSC)RERGL
Gene fusions - Rearrangements
Fusion : MitelmanKRAS/RERGL [12p12.1/12p12.3]  [t(12;12)(p12;p12)]  
Fusion : MitelmanRASSF8/RERGL [12p12.1/12p12.3]  [t(12;12)(p12;p12)]  
Fusion: TCGAKRAS 12p12.1 RERGL 12p12.3 BRCA
Fusion: TCGARASSF8 12p12.1 RERGL 12p12.3 BRCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRERGL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RERGL
dbVarRERGL
ClinVarRERGL
1000_GenomesRERGL 
Exome Variant ServerRERGL
ExAC (Exome Aggregation Consortium)RERGL (select the gene name)
Genetic variants : HAPMAP79785
Genomic Variants (DGV)RERGL [DGVbeta]
DECIPHER (Syndromes)12:18233803-18243127  ENSG00000111404
CONAN: Copy Number AnalysisRERGL 
Mutations
ICGC Data PortalRERGL 
TCGA Data PortalRERGL 
Broad Tumor PortalRERGL
OASIS PortalRERGL [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRERGL  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRERGL
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RERGL
DgiDB (Drug Gene Interaction Database)RERGL
DoCM (Curated mutations)RERGL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RERGL (select a term)
intoGenRERGL
Cancer3DRERGL(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenRERGL
Genetic Testing Registry RERGL
NextProtQ9H628 [Medical]
TSGene79785
GENETestsRERGL
Huge Navigator RERGL [HugePedia]
snp3D : Map Gene to Disease79785
BioCentury BCIQRERGL
ClinGenRERGL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79785
Chemical/Pharm GKB GenePA162401119
Clinical trialRERGL
Miscellaneous
canSAR (ICR)RERGL (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRERGL
EVEXRERGL
GoPubMedRERGL
iHOPRERGL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:17:13 CEST 2017

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