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RESP18 (regulated endocrine specific protein 18)

Identity

Alias_namesregulated endocrine-specific protein 18 homolog (rat)
regulated endocrine-specific protein 18
Other alias-
HGNC (Hugo) RESP18
LocusID (NCBI) 389075
Atlas_Id 72583
Location 2q35  [Link to chromosome band 2q35]
Location_base_pair Starts at 219327409 and ends at 219333177 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RESP18   33762
Cards
Entrez_Gene (NCBI)RESP18  389075  regulated endocrine specific protein 18
Aliases
GeneCards (Weizmann)RESP18
Ensembl hg19 (Hinxton)ENSG00000182698 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182698 [Gene_View]  chr2:219327409-219333177 [Contig_View]  RESP18 [Vega]
ICGC DataPortalENSG00000182698
TCGA cBioPortalRESP18
AceView (NCBI)RESP18
Genatlas (Paris)RESP18
WikiGenes389075
SOURCE (Princeton)RESP18
Genetics Home Reference (NIH)RESP18
Genomic and cartography
GoldenPath hg38 (UCSC)RESP18  -     chr2:219327409-219333177 -  2q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RESP18  -     2q35   [Description]    (hg19-Feb_2009)
EnsemblRESP18 - 2q35 [CytoView hg19]  RESP18 - 2q35 [CytoView hg38]
Mapping of homologs : NCBIRESP18 [Mapview hg19]  RESP18 [Mapview hg38]
OMIM612721   
Gene and transcription
Genbank (Entrez)AF437883 AF439399 DQ227570
RefSeq transcript (Entrez)NM_001007089
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RESP18
Cluster EST : UnigeneHs.290551 [ NCBI ]
CGAP (NCI)Hs.290551
Alternative Splicing GalleryENSG00000182698
Gene ExpressionRESP18 [ NCBI-GEO ]   RESP18 [ EBI - ARRAY_EXPRESS ]   RESP18 [ SEEK ]   RESP18 [ MEM ]
Gene Expression Viewer (FireBrowse)RESP18 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)389075
GTEX Portal (Tissue expression)RESP18
Human Protein AtlasENSG00000182698-RESP18 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5W5W9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5W5W9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5W5W9
Splice isoforms : SwissVarQ5W5W9
PhosPhoSitePlusQ5W5W9
Domains : Interpro (EBI)RESP18    RESP18_dom   
Domain families : Pfam (Sanger)RESP18 (PF14948)   
Domain families : Pfam (NCBI)pfam14948   
Conserved Domain (NCBI)RESP18
DMDM Disease mutations389075
Blocks (Seattle)RESP18
SuperfamilyQ5W5W9
Human Protein Atlas [tissue]ENSG00000182698-RESP18 [tissue]
Peptide AtlasQ5W5W9
HPRD17968
IPIIPI00745945   IPI00160452   IPI00656106   IPI00974187   
Protein Interaction databases
DIP (DOE-UCLA)Q5W5W9
IntAct (EBI)Q5W5W9
FunCoupENSG00000182698
BioGRIDRESP18
STRING (EMBL)RESP18
ZODIACRESP18
Ontologies - Pathways
QuickGOQ5W5W9
Ontology : AmiGOin utero embryonic development  extracellular region  endoplasmic reticulum  Golgi apparatus  
Ontology : EGO-EBIin utero embryonic development  extracellular region  endoplasmic reticulum  Golgi apparatus  
NDEx NetworkRESP18
Atlas of Cancer Signalling NetworkRESP18
Wikipedia pathwaysRESP18
Orthology - Evolution
OrthoDB389075
GeneTree (enSembl)ENSG00000182698
Phylogenetic Trees/Animal Genes : TreeFamRESP18
HOVERGENQ5W5W9
HOGENOMQ5W5W9
Homologs : HomoloGeneRESP18
Homology/Alignments : Family Browser (UCSC)RESP18
Gene fusions - Rearrangements
Tumor Fusion PortalRESP18
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRESP18 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RESP18
dbVarRESP18
ClinVarRESP18
1000_GenomesRESP18 
Exome Variant ServerRESP18
ExAC (Exome Aggregation Consortium)ENSG00000182698
GNOMAD BrowserENSG00000182698
Genetic variants : HAPMAP389075
Genomic Variants (DGV)RESP18 [DGVbeta]
DECIPHERRESP18 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRESP18 
Mutations
ICGC Data PortalRESP18 
TCGA Data PortalRESP18 
Broad Tumor PortalRESP18
OASIS PortalRESP18 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRESP18  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRESP18
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RESP18
DgiDB (Drug Gene Interaction Database)RESP18
DoCM (Curated mutations)RESP18 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RESP18 (select a term)
intoGenRESP18
Cancer3DRESP18(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612721   
Orphanet
DisGeNETRESP18
MedgenRESP18
Genetic Testing Registry RESP18
NextProtQ5W5W9 [Medical]
TSGene389075
GENETestsRESP18
Target ValidationRESP18
Huge Navigator RESP18 [HugePedia]
snp3D : Map Gene to Disease389075
BioCentury BCIQRESP18
ClinGenRESP18
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD389075
Chemical/Pharm GKB GenePA166049014
Clinical trialRESP18
Miscellaneous
canSAR (ICR)RESP18 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRESP18
EVEXRESP18
GoPubMedRESP18
iHOPRESP18
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:06:09 CET 2017

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